RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 PAN3Q58A45 887 aaKnown RBP15.12■□□□□ 0.01
CTDP1-201ENST00000075430 CDCP2Q5VXM1 449 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 NPSR1Q6W5P4 371 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 OOSP2Q86WS3 158 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 MARCH1Q8TCQ1 289 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 ELL3Q9HB65 397 aaPredicted RBP15.12■□□□□ 0.01
CTDP1-201ENST00000075430 SERTAD3Q9UJW9 196 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 MKL2Q9ULH7 1088 aa15.12■□□□□ 0.01
CTDP1-201ENST00000075430 SERINC4A6NH21 518 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 HRH1P35367 487 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 SERPINF1P36955 418 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 TAS2R19P59542 299 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 HFEQ30201 348 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 TMEM196Q5HYL7 178 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 JMJD6Q6NYC1 403 aaPredicted RBP15.11■□□□□ 0.01
CTDP1-201ENST00000075430 CCDC36Q8IYA8 594 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 SVBPQ8N300 66 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 SEMA6DQ8NFY4 1073 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 LCORQ96JN0 433 aaPredicted RBP15.11■□□□□ 0.01
CTDP1-201ENST00000075430 DGAT2Q96PD7 388 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 NIT2Q9NQR4 276 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 TAS2R8Q9NYW2 309 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 ZNF629Q9UEG4 869 aaPredicted RBP15.11■□□□□ 0.01
CTDP1-201ENST00000075430 PURGQ9UJV8 347 aaKnown RBP15.11■□□□□ 0.01
CTDP1-201ENST00000075430 VSIG4Q9Y279 399 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 TMEM218A2RU14 115 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 SDCBPO00560 298 aaPredicted RBP15.11■□□□□ 0.01
CTDP1-201ENST00000075430 ZNF432O94892 652 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 SCGB1D2O95969 90 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 NTSR1P30989 418 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 LBX1P52954 281 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 MRPS10P82664 201 aaKnown RBP15.11■□□□□ 0.01
CTDP1-201ENST00000075430 EBPQ15125 230 aaKnown RBP15.11■□□□□ 0.01
CTDP1-201ENST00000075430 MESTQ5EB52 335 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 NAXDQ8IW45 347 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 CLEC1AQ8NC01 280 aa15.11■□□□□ 0.01
CTDP1-201ENST00000075430 DHCR7Q9UBM7 475 aaKnown RBP15.11■□□□□ 0.01
CTDP1-201ENST00000075430 LOC101059948A0A1B0GTJ6 334 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 MPTX1A8MV57 137 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 B4DGG1 531 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 KNG1P01042 644 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 CASRP41180 1078 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 ZP2Q05996 745 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 SLC29A4Q7RTT9 530 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 TMEM41AQ96HV5 264 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 SLC25A32Q9H2D1 315 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 A0A087WUJ7 227 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 LOC100289279A0A1B0GTE1 492 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 SLC33A1O00400 549 aaPredicted RBP15.1■□□□□ 0.01
CTDP1-201ENST00000075430 AGTR1P30556 359 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 CD80P33681 288 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 RAB13P51153 203 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 FBXO46Q6PJ61 603 aaPredicted RBP15.1■□□□□ 0.01
CTDP1-201ENST00000075430 ZNF764Q96H86 408 aaPredicted RBP15.1■□□□□ 0.01
CTDP1-201ENST00000075430 GAS2L1Q99501 681 aaPredicted RBP15.1■□□□□ 0.01
CTDP1-201ENST00000075430 NUDT22Q9BRQ3 303 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 TMPRSS13Q9BYE2 586 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 NKX2-4Q9H2Z4 354 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 BANF2Q9H503 90 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 CXorf51AA0A1B0GTR3 108 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 SNRNP70P08621 437 aaKnown RBP15.1■□□□□ 0.01
CTDP1-201ENST00000075430 RPA2P15927 270 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 ADCYAP1P18509 176 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 CXCR1P25024 350 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 PPT1P50897 306 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 ACTBP60709 375 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 ACTG1P63261 375 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 C1orf53Q5VUE5 145 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 PAPD4Q6PIY7 484 aaKnown RBP15.1■□□□□ 0.01
CTDP1-201ENST00000075430 FJX1Q86VR8 437 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.1■□□□□ 0.01
CTDP1-201ENST00000075430 FOXRED1Q96CU9 486 aaPredicted RBP15.1■□□□□ 0.01
CTDP1-201ENST00000075430 TSPAN32Q96QS1 320 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 KIR3DX1Q9H7L2 352 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 CHMP1AQ9HD42 196 aaPredicted RBP15.1■□□□□ 0.01
CTDP1-201ENST00000075430 SOHLH2Q9NX45 425 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 PILRAQ9UKJ1 303 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 ICAM5Q9UMF0 924 aa15.1■□□□□ 0.01
CTDP1-201ENST00000075430 A0A087WV62 115 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 TUBAL3A6NHL2 446 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 H0YIG0 161 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 STK17BO94768 372 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 PMS2P2O95744 297 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 FMODQ06828 376 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 PMPCAQ10713 525 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 ELAVL1Q15717 326 aaKnown RBP15.09■□□□□ 0.01
CTDP1-201ENST00000075430 RAB11FIP2Q7L804 512 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 CA13Q8N1Q1 262 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 BCORP1Q8N888 145 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 ANKRD9Q96BM1 317 aaPredicted RBP15.09■□□□□ 0.01
CTDP1-201ENST00000075430 TIMM29Q9BSF4 260 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 PCNX3Q9H6A9 2034 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 VPS13AQ96RL7 3174 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 M0R036 132 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 CYR61O00622 381 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 MTRF1O75570 445 aaKnown RBP15.09■□□□□ 0.01
CTDP1-201ENST00000075430 COL9A1P20849 921 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 SMCO1Q147U7 214 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 FHL5Q5TD97 284 aa15.09■□□□□ 0.01
CTDP1-201ENST00000075430 FAM160A2Q8N612 972 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms