RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Pcdh17E9PXF0 1157 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Wdr25E9Q349 535 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 P2ry2P35383 373 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Rpl18P35980 188 aaKnown RBP14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 MatkP41242 505 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Doc2bP70169 412 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Adgrg5Q3V3Z3 524 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Slc16a11Q5NC32 447 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Rrm2bQ6PEE3 351 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Tas2r143Q7TQB9 293 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 GgnQ80WJ1 673 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Gpr137Q80ZU9 396 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Rell2Q8BRJ3 303 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 PcgF3Q8BTQ0 241 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Cdk5rap1Q8BTW8 588 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr1484Q8VEU6 315 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Bex4Q9CWT2 118 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Tmem41aQ9D8U2 264 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr2Q9QWU6 327 aa14.91□□□□□ -0.02
Shh-201ENSMUST00000002708 PrnA0A075B668 197 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Gm28961A0A087WPA5 222 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr547E9PXN3 311 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Gm11168J3QN50 228 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Emc8O70378 207 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 AhrP30561 848 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Cobll1Q3UMF0 1273 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Azgp1Q64726 307 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Cyb561a3Q6P1H1 242 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr1065Q7TR70 313 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Rtp2Q80ZI2 223 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Vmn1r72Q8K3N7 306 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 CthQ8VCN5 398 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Mrgpra3Q91WW3 302 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Cela1Q91X79 266 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Slc19a3Q99PL8 488 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Rnf138Q9CQE0 245 aaKnown RBP14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Slc48a1Q9D8M3 146 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Tmem176aQ9DCS1 244 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 PrndQ9QUG3 179 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 CenpfE9Q3P4 2997 aaKnown RBP14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Arhgap21Q6DFV3 1944 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr1082A0A1L1SUC9 313 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Mcpt9O35164 246 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Ly6aP05533 134 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Bpifa2P07743 235 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Igsf6P0C6B7 237 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Cox5bP19536 128 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Slc5a6Q5U4D8 634 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Art1Q60935 325 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 CcinQ8CDE2 588 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr780Q8VEU0 312 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr1110Q8VG38 312 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Slco1a6Q99J94 670 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Mrps14Q9CR88 128 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 MNCb-2990Q9JJ93 142 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr545Q9WU94 316 aa14.9□□□□□ -0.02
Shh-201ENSMUST00000002708 Myo15aQ9QZZ4 3511 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Tmem229aB9EJI9 371 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr889L7N1Y6 314 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Zp3rQ60736 579 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Adam20Q7M763 760 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Ing4Q8C0D7 249 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Q8C4X7 151 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Rhno1Q8K3A4 235 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 ApehQ8R146 732 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Vmn1r23Q8R2D0 302 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr486Q8VFD0 314 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Q99K99 313 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 PigkQ9CXY9 395 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Gabra4Q9D6F4 552 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Stard5Q9EPQ7 213 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Slc7a11Q9WTR6 502 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Gk2Q9WU65 554 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Kcnj16Q9Z307 419 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Ccdc166S4R181 449 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Loxhd1C8YR32 2068 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Gm35315A0A1B0GRI2 571 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Vmn1r67G5E8C1 305 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Vmn2r89O35199 507 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 CdaP56389 146 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 MplQ08351 625 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Mtcp1Q60945 107 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Slc35a1Q61420 336 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Spin2cQ6NVE3 257 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr429Q7TRW1 312 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 SheQ8BSD5 492 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Apoa5Q8C7G5 368 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Thap7Q8VCZ3 309 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Ca13Q9D6N1 262 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Ethe1Q9DCM0 254 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 Clec3aQ9EPW4 196 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 C1galt1Q9JJ06 363 aa14.89□□□□□ -0.03
Shh-201ENSMUST00000002708 4930467E23RikD3Z1P8 350 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr520E9Q518 316 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Gm15319E9Q637 350 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Il5raP21183 415 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 PdgfbP31240 241 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Fzd7Q61090 572 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Tas2r116Q7M713 305 aa14.88□□□□□ -0.03
Shh-201ENSMUST00000002708 Tnfsfm13Q8BXS2 410 aa14.88□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 88.8 ms