RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 LHFPL5Q8TAF8 219 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 ST8SIA4Q92187 359 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 ZNF285Q96NJ3 590 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 IFT22Q9H7X7 185 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 MED11Q9P086 117 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 FBXO4Q9UKT5 387 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 CEP290O15078 2479 aa12.44□□□□□ -0.42
PHGDH-233ENST00000642021 IGLV1-36A0A0B4J1U3 117 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 A0A1W2PPC1 479 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 NUPL2O15504 423 aaKnown RBP12.43□□□□□ -0.42
PHGDH-233ENST00000642021 DRD1P21728 446 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 MPGP29372 298 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 PPM1FP49593 454 aaPredicted RBP12.43□□□□□ -0.42
PHGDH-233ENST00000642021 C17orf107Q6ZR85 190 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 KRT77Q7Z794 578 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 BVESQ8NE79 360 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 OR5M9Q8NGP3 310 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 ZNF519Q8TB69 540 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 SLC46A1Q96NT5 459 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 TGM7Q96PF1 710 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 SOHLH2Q9NX45 425 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 DHDHQ9UQ10 334 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 PHYHO14832 338 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 SIGLEC5O15389 551 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 RAB3DO95716 219 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 DDAH2O95865 285 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 IGKV3-11P04433 115 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 CAPZBP47756 277 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 RPL27P61353 136 aaKnown RBP12.43□□□□□ -0.42
PHGDH-233ENST00000642021 ADAM8P78325 824 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 ZP2Q05996 745 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 SIGLEC14Q08ET2 396 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 UBXN2BQ14CS0 331 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 SHHQ15465 462 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 COL13A1Q5TAT6 717 aaPredicted RBP12.43□□□□□ -0.42
PHGDH-233ENST00000642021 SLC18B1Q6NT16 456 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 OVCH2Q7RTZ1 564 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 CDH26Q8IXH8 852 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 ADAMTS18Q8TE60 1221 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 ZNF721Q8TF20 911 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 ABHD6Q9BV23 337 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 NUDT9Q9BW91 350 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 WDR13Q9H1Z4 485 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 NKX2-4Q9H2Z4 354 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 C1orf198Q9H425 327 aa12.43□□□□□ -0.42
PHGDH-233ENST00000642021 TRAV36DV7A0A075B6V5 113 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 BET1O15155 118 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 LMX1BO60663 402 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 OR6A2O95222 327 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 HTR2CP28335 458 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 RORAP35398 523 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 MPPED2Q15777 294 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-233ENST00000642021 TTLL10Q6ZVT0 673 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 NUP54Q7Z3B4 507 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 ZNF454Q8N9F8 522 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 OR6K3Q8NGY3 331 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 SLC41A2Q96JW4 573 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 OR11A1Q9GZK7 315 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 ALX4Q9H161 411 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-233ENST00000642021 PRMT8Q9NR22 394 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-233ENST00000642021 PFDN2Q9UHV9 154 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 PLCL2Q9UPR0 1127 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 LRP12Q9Y561 859 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 PCDH15Q96QU1 1955 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 RP1P56715 2156 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 TMEM82A0PJX8 343 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 FRG2CA6NGY1 282 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 SNAPC5O75971 98 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 ZNF735P0CB33 412 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 HLA-DOBP13765 273 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 ZNF28P17035 718 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 ACHEP22303 614 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 GALNSP34059 522 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 NR0B1P51843 470 aaKnown RBP12.42□□□□□ -0.42
PHGDH-233ENST00000642021 GPR85P60893 370 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 GMFBP60983 142 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 ROM1Q03395 351 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 SPOCK1Q08629 439 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 BIKQ13323 160 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 CCINQ13939 588 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 C12orf45Q8N5I9 185 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-233ENST00000642021 OR10Z1Q8NGY1 313 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 SLC25A44Q96H78 314 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-233ENST00000642021 USB1Q9BQ65 265 aaKnown RBP12.42□□□□□ -0.42
PHGDH-233ENST00000642021 GPR27Q9NS67 375 aa12.42□□□□□ -0.42
PHGDH-233ENST00000642021 RFPL4AA6NLU0 287 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 HSPB2A8KAH6 182 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 RFPL4AL1F8VTS6 287 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 AMY2AP04746 511 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 LIPCP11150 499 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 RPA2P15927 270 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 IGFBP3P17936 291 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-233ENST00000642021 EIF2B1Q14232 305 aaKnown RBP12.41□□□□□ -0.42
PHGDH-233ENST00000642021 HSPB2Q16082 182 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 ATPAF1Q5TC12 328 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-233ENST00000642021 KIAA0895LQ68EN5 471 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 ATRAIDQ6UW56 229 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 CATSPERDQ86XM0 798 aa12.41□□□□□ -0.42
PHGDH-233ENST00000642021 WDFY1Q8IWB7 410 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms