RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 C20orf196Q8IYI0 205 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 RBMXL3Q8N7X1 1067 aaKnown RBP11.6□□□□□ -0.55
PHGDH-221ENST00000641573 ZNF454Q8N9F8 522 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 OR10H5Q8NGA6 315 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 ABHD3Q8WU67 409 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 C11orf40Q8WZ69 217 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 PELI1Q96FA3 418 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 CENPOQ9BU64 300 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 PRRG4Q9BZD6 226 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 EXOSC4Q9NPD3 245 aaKnown RBP11.6□□□□□ -0.55
PHGDH-221ENST00000641573 MRM2Q9UI43 246 aaKnown RBP11.6□□□□□ -0.55
PHGDH-221ENST00000641573 ING1Q9UK53 422 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-221ENST00000641573 SSR3Q9UNL2 185 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 CAMK2AQ9UQM7 478 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 RCE1Q9Y256 329 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 SF3B6Q9Y3B4 125 aaKnown RBP11.6□□□□□ -0.55
PHGDH-221ENST00000641573 GRIP1Q9Y3R0 1128 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 FREM3P0C091 2139 aa11.6□□□□□ -0.55
PHGDH-221ENST00000641573 SETD2Q9BYW2 2564 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-221ENST00000641573 IGKV3D-15A0A087WSY6 115 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 A0A1B0GVC2 190 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 PSMD9O00233 223 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 SLC43A1O75387 559 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 KRT8P05787 483 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 TACSTD2P09758 323 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 OR8G3PP0DMU2 310 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 ZNF182P17025 639 aaPredicted RBP11.59□□□□□ -0.55
PHGDH-221ENST00000641573 GABRA5P31644 462 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 PSMB10P40306 273 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 ZNF133P52736 654 aaPredicted RBP11.59□□□□□ -0.55
PHGDH-221ENST00000641573 EIF2B1Q14232 305 aaKnown RBP11.59□□□□□ -0.55
PHGDH-221ENST00000641573 ARL9Q6T311 187 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 FAM220AQ7Z4H9 259 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 KCTD20Q7Z5Y7 419 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 EGFL6Q8IUX8 553 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 SIAH3Q8IW03 269 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 RNF128Q8TEB7 428 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 ASB17Q8WXJ9 295 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 TMEM203Q969S6 136 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 TMEM45BQ96B21 275 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 TAAR6Q96RI8 345 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 AMELYQ99218 206 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 TTYH2Q9BSA4 534 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 RNF167Q9H6Y7 350 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 SEC61A2Q9H9S3 476 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 ACOXLQ9NUZ1 547 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 ST6GALNAC2Q9UJ37 374 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 IKZF2Q9UKS7 526 aa11.59□□□□□ -0.55
PHGDH-221ENST00000641573 AQP7O14520 342 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 GPR171O14626 319 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 OGG1O15527 345 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 SULT1C4O75897 302 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 AQP8O94778 261 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 ABHD16AO95870 558 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 CD53P19397 219 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 NTF4P34130 210 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 UGT2B10P36537 528 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 SERPINB10P48595 397 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 SIRPAP78324 504 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 SLC3A1Q07837 685 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 MRPL49Q13405 166 aaKnown RBP11.58□□□□□ -0.56
PHGDH-221ENST00000641573 PCK2Q16822 640 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 C10orf128Q5T292 105 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 DMKNQ6E0U4 476 aaPredicted RBP11.58□□□□□ -0.56
PHGDH-221ENST00000641573 RPL22L1Q6P5R6 122 aaKnown RBP11.58□□□□□ -0.56
PHGDH-221ENST00000641573 PLXDC2Q6UX71 529 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 RPTNQ6XPR3 784 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 USP43Q70EL4 1123 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 YIPF7Q8N8F6 280 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 KBTBD8Q8NFY9 601 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 FNDC9Q8TBE3 224 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 TRMT61AQ96FX7 289 aaKnown RBP11.58□□□□□ -0.56
PHGDH-221ENST00000641573 OR8B4Q96RC9 309 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 TM9SF2Q99805 663 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 ABHD6Q9BV23 337 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 TMED9Q9BVK6 235 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 ULBP2Q9BZM5 246 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 DCSTAMPQ9H295 470 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 EMC7Q9NPA0 242 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 SLCO1C1Q9NYB5 712 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 EMC3Q9P0I2 261 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 FOXD3Q9UJU5 478 aaPredicted RBP11.58□□□□□ -0.56
PHGDH-221ENST00000641573 UGT2A1Q9Y4X1 527 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 CSMD1Q96PZ7 3565 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 CNTRLQ7Z7A1 2325 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 KIAA1549Q9HCM3 1950 aa11.58□□□□□ -0.56
PHGDH-221ENST00000641573 HIVEP3Q5T1R4 2406 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 TRDV1A0A1B0GX56 115 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 WIPF3A6NGB9 483 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 DHHO43323 396 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 PLPP2O43688 288 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 TMCC2O75069 709 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 UPK3AO75631 287 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 WISP2O76076 250 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 RPP14O95059 124 aaKnown RBP11.57□□□□□ -0.56
PHGDH-221ENST00000641573 HLA-DPB1P04440 258 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 EDNRAP25101 427 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 CDAP32320 146 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 TGM4P49221 684 aa11.57□□□□□ -0.56
PHGDH-221ENST00000641573 FABP5Q01469 135 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms