RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 MRPS18CQ9Y3D5 142 aaKnown RBP19.65■□□□□ 0.74
PNKP-220ENST00000627232 ETV7Q9Y603 341 aa19.65■□□□□ 0.74
PNKP-220ENST00000627232 NCOR1O75376 2440 aa19.64■□□□□ 0.73
PNKP-220ENST00000627232 TTLL8A6PVC2 850 aa19.64■□□□□ 0.73
PNKP-220ENST00000627232 CTDSPLO15194 276 aa19.64■□□□□ 0.73
PNKP-220ENST00000627232 RAMP1O60894 148 aa19.64■□□□□ 0.73
PNKP-220ENST00000627232 DNASE1L1P49184 302 aa19.64■□□□□ 0.73
PNKP-220ENST00000627232 MMP15P51511 669 aa19.64■□□□□ 0.73
PNKP-220ENST00000627232 KCNMB1Q16558 191 aa19.64■□□□□ 0.73
PNKP-220ENST00000627232 HES3Q5TGS1 186 aa19.64■□□□□ 0.73
PNKP-220ENST00000627232 DHRS13Q6UX07 377 aa19.64■□□□□ 0.73
PNKP-220ENST00000627232 DUSP18Q8NEJ0 188 aa19.64■□□□□ 0.73
PNKP-220ENST00000627232 OR51A4Q8NGJ6 313 aa19.64■□□□□ 0.73
PNKP-220ENST00000627232 KCNE4Q8WWG9 221 aa19.64■□□□□ 0.73
PNKP-220ENST00000627232 PSMF1Q92530 271 aa19.64■□□□□ 0.73
PNKP-220ENST00000627232 ABHD1Q96SE0 405 aa19.64■□□□□ 0.73
PNKP-220ENST00000627232 HDHD2Q9H0R4 259 aa19.64■□□□□ 0.73
PNKP-220ENST00000627232 TRAV8-7A0A075B6U6 113 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 A0A1W2PPL8 197 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 ANXA2P2A6NMY6 339 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 RAD1O60671 282 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 ISG15P05161 165 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 ANXA2P07355 339 aaKnown RBP19.63■□□□□ 0.73
PNKP-220ENST00000627232 H2BFMP0C1H6 154 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 ACHEP22303 614 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 KIR2DL3P43628 341 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 CYB561P49447 251 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 B3GALT5-AS1P59052 145 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 ZNF57Q68EA5 555 aaPredicted RBP19.63■□□□□ 0.73
PNKP-220ENST00000627232 ZNF704Q6ZNC4 412 aaPredicted RBP19.63■□□□□ 0.73
PNKP-220ENST00000627232 AKAP14Q86UN6 197 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 BEST3Q8N1M1 668 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 SUMF1Q8NBK3 374 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 THOC3Q96J01 351 aaKnown RBP19.63■□□□□ 0.73
PNKP-220ENST00000627232 C1orf198Q9H425 327 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 G6PC2Q9NQR9 355 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 GTF2A1LQ9UNN4 478 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 DHDHQ9UQ10 334 aa19.63■□□□□ 0.73
PNKP-220ENST00000627232 SPEM2Q0P670 501 aa19.62■□□□□ 0.73
PNKP-220ENST00000627232 ODF4Q2M2E3 257 aa19.62■□□□□ 0.73
PNKP-220ENST00000627232 RHOUQ7L0Q8 258 aa19.62■□□□□ 0.73
PNKP-220ENST00000627232 ZNF227Q86WZ6 799 aa19.62■□□□□ 0.73
PNKP-220ENST00000627232 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.62■□□□□ 0.73
PNKP-220ENST00000627232 CMTM4Q8IZR5 234 aa19.62■□□□□ 0.73
PNKP-220ENST00000627232 RAB40AQ8WXH6 277 aa19.62■□□□□ 0.73
PNKP-220ENST00000627232 ABCG5Q9H222 651 aa19.62■□□□□ 0.73
PNKP-220ENST00000627232 LIN7BQ9HAP6 207 aa19.62■□□□□ 0.73
PNKP-220ENST00000627232 OR52A1Q9UKL2 312 aa19.62■□□□□ 0.73
PNKP-220ENST00000627232 FOXJ3Q9UPW0 622 aa19.62■□□□□ 0.73
PNKP-220ENST00000627232 A0A1B0GVC2 190 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 A6NIN4 97 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 GSTZ1O43708 216 aaPredicted RBP19.61■□□□□ 0.73
PNKP-220ENST00000627232 CD2P06729 351 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 FAM157BP0CG42 384 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 MMP16P51512 607 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 AGFG1P52594 562 aaKnown RBP19.61■□□□□ 0.73
PNKP-220ENST00000627232 CLDN17P56750 224 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 DTX3Q8N9I9 347 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 ADAMTS17Q8TE56 1095 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 SLAMF6Q96DU3 332 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 IP6K3Q96PC2 410 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 MMP28Q9H239 520 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 RNF121Q9H920 327 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 OR5V1Q9UGF6 321 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 FBXL3Q9UKT7 428 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 HHLA2Q9UM44 414 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 CLEC4AQ9UMR7 237 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 EMC9Q9Y3B6 208 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 A0A0G2JMM0 328 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 A0A0J9YW62 118 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 A0A1W2PPB8 328 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 A0A1W2PRS3 328 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 LRRC3CA6NJW4 275 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 KIR3DP1A8MWS1 328 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 TPPPO94811 219 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 MAS1P04201 325 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 FSTP19883 344 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 KLK2P20151 261 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 CNR1P21554 472 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 CD300CQ08708 224 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 TMEM244Q5VVB8 128 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 CARD17Q5XLA6 110 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 ASB18Q6ZVZ8 466 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 CREB3L2Q70SY1 520 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 FCRLAQ7L513 359 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 GLRX5Q86SX6 157 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 TMPRSS12Q86WS5 348 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 ASB5Q8WWX0 329 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 PPP1R14AQ96A00 147 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 SLC25A38Q96DW6 304 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 CENPMQ9NSP4 180 aa19.61■□□□□ 0.73
PNKP-220ENST00000627232 LOC101059948A0A1B0GTJ6 334 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 FAM240BA0A1B0GVZ2 78 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 TMEM269A0A1B0GVZ9 245 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 EEF1E1O43324 174 aaKnown RBP19.6■□□□□ 0.73
PNKP-220ENST00000627232 SULT1B1O43704 296 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 TNFSF15O95150 251 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 QDPRP09417 244 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 UBCP0CG48 685 aaKnown RBP19.6■□□□□ 0.73
PNKP-220ENST00000627232 ZNF133P52736 654 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms