RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 CCDC182A6NF36 153 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 WIPF3A6NGB9 483 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 A6NJ64 397 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 CLDN4O14493 209 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 PAGE4O60829 102 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 STX11O75558 287 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 CD63P08962 238 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 GABRA5P31644 462 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 MGAT2Q10469 447 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 ASAH1Q13510 395 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 TBRG1Q3YBR2 411 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 HES5Q5TA89 166 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 LCN10Q6JVE6 187 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 FAM199XQ6PEV8 388 aaPredicted RBP10.44□□□□□ -0.74
LINC00538-201ENST00000626109 BCDIN3DQ7Z5W3 292 aaKnown RBP10.44□□□□□ -0.74
LINC00538-201ENST00000626109 NRARPQ7Z6K4 114 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 LAX1Q8IWV1 398 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 ZNF595Q8IYB9 648 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 WFDC6Q9BQY6 131 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 KCNN2Q9H2S1 579 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 BRD7Q9NPI1 651 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 MED17Q9NVC6 651 aa10.44□□□□□ -0.74
LINC00538-201ENST00000626109 A0A1B0GW15 77 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 A0A1W2PQL4 384 aaPredicted RBP10.43□□□□□ -0.74
LINC00538-201ENST00000626109 PRKRAO75569 313 aaKnown RBP10.43□□□□□ -0.74
LINC00538-201ENST00000626109 IL7P13232 177 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 TCN2P20062 427 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 FGF9P31371 208 aaPredicted RBP10.43□□□□□ -0.74
LINC00538-201ENST00000626109 PPP3R1P63098 170 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 MXD1Q05195 221 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 HNRNPA0Q13151 305 aaKnown RBP10.43□□□□□ -0.74
LINC00538-201ENST00000626109 GPR50Q13585 617 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 VWA2Q5GFL6 755 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 C22orf42Q6IC83 251 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 SLC48A1Q6P1K1 146 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 C16orf62Q7Z3J2 963 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 LHFPL4Q7Z7J7 247 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 CDK20Q8IZL9 346 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 IL22RA1Q8N6P7 574 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 NUP43Q8NFH3 380 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 OR5D18Q8NGL1 313 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 CT55Q8WUE5 264 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 FAM46BQ96A09 425 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 PHF21AQ96BD5 680 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 TECTBQ96PL2 329 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 SNX18Q96RF0 628 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 ARHGDIGQ99819 225 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 ALG12Q9BV10 488 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 RSPO3Q9BXY4 272 aaPredicted RBP10.43□□□□□ -0.74
LINC00538-201ENST00000626109 CDIP1Q9H305 208 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 WDR54Q9H977 334 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 ABCB9Q9NP78 766 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 KLHL1Q9NR64 748 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 PRTFDC1Q9NRG1 225 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 PTTG3PQ9NZH4 202 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 STARD10Q9Y365 291 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 SCN3AQ9NY46 2000 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 A0A087WUU8 490 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 FAM172BPA6NC97 362 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 CENPXA8MT69 81 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 RAB40ALP0C0E4 278 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 ZGLP1P0C6A0 271 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 LIPCP11150 499 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 GIFP27352 417 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 CEBPGP53567 150 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 ATP5J2P56134 94 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 RIN1Q13671 783 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 ETFDHQ16134 617 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 GLYR1Q49A26 553 aaPredicted RBP10.43□□□□□ -0.74
LINC00538-201ENST00000626109 TYW3Q6IPR3 259 aaKnown RBP10.43□□□□□ -0.74
LINC00538-201ENST00000626109 MRPL14Q6P1L8 145 aaKnown RBP10.43□□□□□ -0.74
LINC00538-201ENST00000626109 PAQR6Q6TCH4 344 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 TMEM107Q6UX40 140 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 QSOX2Q6ZRP7 698 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 SHISA5Q8N114 240 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 FGF11Q92914 225 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 WDR89Q96FK6 387 aaPredicted RBP10.43□□□□□ -0.74
LINC00538-201ENST00000626109 OR7D2Q96RA2 312 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 ACTRT3Q9BYD9 372 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 SRD5A3Q9H8P0 318 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 TIGARQ9NQ88 270 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 MMACHCQ9Y4U1 282 aa10.43□□□□□ -0.74
LINC00538-201ENST00000626109 KNTC1P50748 2209 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 TRDV1A0A1B0GX56 115 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 TUBAL3A6NHL2 446 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 VSTM2BA6NLU5 285 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 C21orf140B9A014 251 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 HLA-DPB1P04440 258 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 HK1P19367 917 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 DDOSTP39656 456 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 CDH11P55287 796 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 ZNF79Q15937 498 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 PYDC2Q56P42 97 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 PRICKLE2Q7Z3G6 844 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 WDR53Q7Z5U6 358 aaPredicted RBP10.42□□□□□ -0.74
LINC00538-201ENST00000626109 DTX1Q86Y01 620 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 TMEM52Q8NDY8 209 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 BEND2Q8NDZ0 799 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 OR6F1Q8NGZ6 308 aa10.42□□□□□ -0.74
LINC00538-201ENST00000626109 ACOT11Q8WXI4 607 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms