RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 ATP12AP54707 1039 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 POU6F2P78424 691 aaPredicted RBP4.9□□□□□ -1.63
CDKL5-204ENST00000623364 HSF2Q03933 536 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 C1DQ13901 141 aaKnown RBP4.9□□□□□ -1.63
CDKL5-204ENST00000623364 C11orf63Q6NUN7 778 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 KLHL7Q8IXQ5 586 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 C4orf3Q8WVX3 66 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 OR2M2Q96R28 347 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 OR4C12Q96R67 309 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 MECRQ9BV79 373 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 BTBD2Q9BX70 525 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 GOLPH3Q9H4A6 298 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 RABEP2Q9H5N1 569 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 LIN7BQ9HAP6 207 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 OPTCQ9UBM4 332 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 VWA7Q9Y334 891 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 TMED7Q9Y3B3 224 aa4.9□□□□□ -1.63
CDKL5-204ENST00000623364 TMEM72A0PK05 275 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 ZC3H12DA2A288 527 aaKnown RBP4.89□□□□□ -1.63
CDKL5-204ENST00000623364 H0YAE9 185 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 FCN3O75636 299 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 FARS2O95363 451 aaKnown RBP4.89□□□□□ -1.63
CDKL5-204ENST00000623364 GYPAP02724 150 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 SMR3BP02814 79 aaPredicted RBP4.89□□□□□ -1.63
CDKL5-204ENST00000623364 RPLP1P05386 114 aaKnown RBP4.89□□□□□ -1.63
CDKL5-204ENST00000623364 OR8U9P0C7N5 309 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 UBTFL6P0CB48 400 aaPredicted RBP4.89□□□□□ -1.63
CDKL5-204ENST00000623364 STOMP27105 288 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 CETN2P41208 172 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 SLC9A3P48764 834 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 MARCKSL1P49006 195 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 ZNF75DP51815 510 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 XGP55808 180 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 RBMS2Q15434 407 aaKnown RBP4.89□□□□□ -1.63
CDKL5-204ENST00000623364 DUSP5Q16690 384 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 SLC36A2Q495M3 483 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 HSP90AA5PQ58FG0 334 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 CXorf66Q5JRM2 361 aaPredicted RBP4.89□□□□□ -1.63
CDKL5-204ENST00000623364 CARD17Q5XLA6 110 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 TTC19Q6DKK2 380 aaPredicted RBP4.89□□□□□ -1.63
CDKL5-204ENST00000623364 TEX38Q6PEX7 206 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 Q6ZR54 194 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 RFPL4BQ6ZWI9 263 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 C20orf196Q8IYI0 205 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 TMEM123Q8N131 208 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 DYNAPQ8N1N2 210 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 SLC22A24Q8N4F4 322 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 BOLLQ8N9W6 283 aaKnown RBP4.89□□□□□ -1.63
CDKL5-204ENST00000623364 C2CD4AQ8NCU7 369 aaPredicted RBP4.89□□□□□ -1.63
CDKL5-204ENST00000623364 OR10AD1Q8NGE0 317 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 BCAS4Q8TDM0 211 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 RGP1Q92546 391 aaPredicted RBP4.89□□□□□ -1.63
CDKL5-204ENST00000623364 DCUN1D4Q92564 292 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 LRGUKQ96M69 825 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 ULBP2Q9BZM5 246 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 HEXA-AS1Q9H8Q6 139 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 DUSP22Q9NRW4 184 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 DNAJB9Q9UBS3 223 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 ZNF232Q9UNY5 417 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 ATP6V1DQ9Y5K8 247 aa4.89□□□□□ -1.63
CDKL5-204ENST00000623364 PKHD1L1Q86WI1 4243 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 ZCWPW2A0A1B0GU75 182 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 MAGEB16A2A368 324 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 C5orf49A4QMS7 147 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 MAGEA13PA6NCF6 341 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 FAM90A8PA6NJQ4 464 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 SH2D7A6NKC9 451 aaPredicted RBP4.88□□□□□ -1.63
CDKL5-204ENST00000623364 MS4A18H0YCH9 400 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 CSTAP01040 98 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 OXTP01178 125 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 SERPING1P05155 500 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 IL3P08700 152 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 TMEM253P0C7T8 217 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 KITLGP21583 273 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 PTPN7P35236 360 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 POLR2HP52434 150 aaKnown RBP4.88□□□□□ -1.63
CDKL5-204ENST00000623364 ZNF616Q08AN1 781 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 ECH1Q13011 328 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 UAP1Q16222 522 aaPredicted RBP4.88□□□□□ -1.63
CDKL5-204ENST00000623364 SSX2Q16385 188 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 KCTD19Q17RG1 926 aaPredicted RBP4.88□□□□□ -1.63
CDKL5-204ENST00000623364 SMU1Q2TAY7 513 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 HHATQ5VTY9 493 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 SZRD1Q7Z422 152 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 TSEN54Q7Z6J9 526 aaKnown RBP4.88□□□□□ -1.63
CDKL5-204ENST00000623364 LHFPL4Q7Z7J7 247 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 KDM8Q8N371 416 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 OR1N2Q8NGR9 330 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 Q8TCH9 128 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 DEFB104AQ8WTQ1 72 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 H1FXQ92522 213 aaKnown RBP4.88□□□□□ -1.63
CDKL5-204ENST00000623364 ERGIC1Q969X5 290 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 TMEM106AQ96A25 262 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 MALSU1Q96EH3 234 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 CHMP6Q96FZ7 201 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 LRR1Q96L50 414 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 NOL4LQ96MY1 436 aaPredicted RBP4.88□□□□□ -1.63
CDKL5-204ENST00000623364 SH3GL3Q99963 347 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 MFFQ9GZY8 342 aa4.88□□□□□ -1.63
CDKL5-204ENST00000623364 SLA2Q9H6Q3 261 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms