RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 LAIR1Q6GTX8 287 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 LRRC18Q8N456 261 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SLC24A4Q8NFF2 622 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SDHCQ99643 169 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SHARPINQ9H0F6 387 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 ANGPTL7O43827 346 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 P2RY4P51582 365 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 MCHR2Q969V1 340 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 CPNE4Q96A23 557 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 TSSK2Q96PF2 358 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 PLRG1O43660 514 aaKnown RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF728P0DKX0 622 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 OR3A1P47881 315 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 TMEM267Q0VDI3 215 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 FAM199XQ6PEV8 388 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 FAM57BQ71RH2 274 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 OR52E1Q8NGJ3 308 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 OR14C36Q8NHC7 312 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 CLSTN3Q9BQT9 956 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 STARD10Q9Y365 291 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 F6UZH7 168 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 CD82P27701 267 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SLC6A12P48065 614 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 LTC4SQ16873 150 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 RNF180Q86T96 592 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 BAP18Q8IXM2 172 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 AMER3Q8N944 861 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 MYOTQ9UBF9 498 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 A0A0B4J293 547 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 LEFTY1O75610 366 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 CMPK1P30085 196 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 GALR1P47211 349 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 PGFP49763 221 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 LIM2P55344 173 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 DHRS2Q13268 280 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 LRIF1Q5T3J3 769 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 LILRA3Q8N6C8 439 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 KLHDC9Q8NEP7 349 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SLC22A18Q96BI1 424 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 COA4Q9NYJ1 87 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 F5H5K5 113 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 G3V3Q6 166 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 CSTAP01040 98 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 TNFSF4P23510 183 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 CRMP1Q14194 572 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 CIB3Q96Q77 187 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SMIM7Q9BQ49 75 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 PTGES2Q9H7Z7 377 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 ASB6Q9NWX5 421 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 FUT9Q9Y231 359 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 IGHV3-64DA0A0J9YX35 117 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SNRPGP15A8MWD9 76 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 EIF1BO60739 113 aaKnown RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 CHRM4P08173 479 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 HBQ1P09105 142 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SLC6A1P30531 599 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 EIF1P41567 113 aaKnown RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SLC11A1P49279 550 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 TCL1AP56279 114 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 AARDQ4LEZ3 155 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SPINK9Q5DT21 86 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 ANGPTL5Q86XS5 388 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 C10orf111Q8N326 155 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 NEUROD4Q9HD90 331 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SEC14L6B5MCN3 397 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 PMP22Q01453 160 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 ASTLQ6HA08 431 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 MR1Q95460 341 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 BORCS8Q96FH0 119 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 TBX15Q96SF7 602 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 AOAHP28039 575 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 PDE7AQ13946 482 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 INPP5JQ15735 1006 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 FAM78BQ5VT40 261 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 OR6C3Q9NZP0 311 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SGK494L7N484 410 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 CHRNB4P30926 498 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SULT1A2P50226 295 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 CLN3Q13286 438 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 C11orf87Q6NUJ2 197 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 HSD11B1LQ7Z5J1 315 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 SLC35B3Q9H1N7 401 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 A4GNTQ9UNA3 340 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 WASHC3Q9Y3C0 194 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 OR1A2Q9Y585 309 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 ARID1BQ8NFD5 2236 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-214ENST00000620676 TUBAL3A6NHL2 446 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 FCGR2AP12318 317 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 OPRD1P41143 372 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 VEZF1Q14119 521 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 KMT5CQ86Y97 462 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 C17orf47Q8NEP4 570 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 CPT1CQ8TCG5 803 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 GPX8Q8TED1 209 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 DGAT2Q96PD7 388 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 CITO14578 2027 aa4.61□□□□□ -1.67
VPS13D-214ENST00000620676 A0A1B0GTQ1 180 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 HEPACAM2A8MVW5 462 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 CDRT15L2A8MXV6 281 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 LDB3O75112 727 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms