RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 LYPD3O95274 346 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 ASAH2BP0C7U1 165 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 CTLA4P16410 223 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 RAD52P43351 418 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 PWWP2BQ6NUJ5 590 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 OPN5Q6U736 354 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 MAMSTRQ6ZN01 415 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 C9orf40Q8IXQ3 194 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 D2HGDHQ8N465 521 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 OR5M1Q8NGP8 315 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 ZNF721Q8TF20 911 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 GAREM1Q9H706 876 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 RP1P56715 2156 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 C4orf47A7E2U8 309 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 DCTN6O00399 190 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 SEC14L5O43304 696 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 XRCC3O43542 346 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 ZNF254O75437 659 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 SCGNO76038 276 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 AKR1C4P17516 323 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 CD34P28906 385 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 PLA1AQ53H76 456 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 ALKBH2Q6NS38 261 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 CDC20BQ86Y33 519 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 AGBL5Q8NDL9 886 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 PCNPQ8WW12 178 aaKnown RBP8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 EDAQ92838 391 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 SCGB3A2Q96PL1 93 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 GPX7Q96SL4 187 aaPredicted RBP8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 LANCL2Q9NS86 450 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 FOXJ3Q9UPW0 622 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 B3GALT5Q9Y2C3 310 aa8.31□□□□□ -1.08
RBFOX1-223ENST00000620507 OR14I1A6ND48 311 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 OR2J2O76002 312 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 LIPCP11150 499 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 PGAM2P15259 253 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 RAG2P55895 527 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 ETFDHQ16134 617 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 ST3GAL2Q16842 350 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 LINC00303Q3SY05 128 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 C3orf33Q6P1S2 294 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 COX15Q7KZN9 410 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 CPEB2Q7Z5Q1 589 aaKnown RBP8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 ADGRE4PQ86SQ3 457 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 NR2C2APQ86WQ0 139 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 C12orf45Q8N5I9 185 aaPredicted RBP8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 NPRL2Q8WTW4 380 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 ZNF160Q9HCG1 818 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 LRP12Q9Y561 859 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 IGKV1D-42A0A075B6H8 117 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 A0A1W2PNR3 127 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 A0A1W2PQD3 144 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 TMEM82A0PJX8 343 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 SLC22A23A1A5C7 686 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 FITM1A5D6W6 292 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 OR4C45A6NMZ5 311 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 OR2AT4A6NND4 320 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 SLC17A2O00624 439 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 SIGLEC6O43699 453 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 DDAH2O95865 285 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 BCKDHBP21953 392 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 ACHEP22303 614 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 NFYAP23511 347 aaPredicted RBP8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 CSNK1A1P48729 337 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 LIMK1P53667 647 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 IFITM2Q01629 132 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 SCRN3Q0VDG4 424 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 FOXF1Q12946 379 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 GSG1Q2KHT4 349 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 TSSK4Q6SA08 328 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 C3P1Q6ZMU1 363 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 TRILQ7L0X0 811 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 STX12Q86Y82 276 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 NKAIN3Q8N8D7 197 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 HOXB13Q92826 284 aaPredicted RBP8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 NKX3-1Q99801 234 aaPredicted RBP8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 PRRT1Q99946 306 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 BRCA2P51587 3418 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 A0A1B0GUH1 482 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 ANKUB1A6NFN9 424 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 J3QRE1 110 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 M0QYG6 137 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 GMDSO60547 372 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 CRTAPO75718 401 aaPredicted RBP8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 IGLV3-19P01714 112 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 SLC2A1P11166 492 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 AGTR1P30556 359 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 FMODQ06828 376 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 FGL1Q08830 312 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 MEF2DQ14814 521 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 OPCMLQ14982 345 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 OR10K2Q6IF99 312 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 COMMD7Q86VX2 200 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 FAM109AQ8N4B1 249 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 NAXEQ8NCW5 288 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 OR10AC1Q8NH08 325 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 RNF128Q8TEB7 428 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 FGF11Q92914 225 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 SLAMF6Q96DU3 332 aa8.3□□□□□ -1.08
RBFOX1-223ENST00000620507 RNF170Q96K19 258 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms