RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	OR51S1	Q8NGJ8	323 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	C15orf40	Q8WUR7	153 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	SLC25A44	Q96H78	314 aa	Predicted RBP	10.05	□□□□□ -0.8
TP53-223	ENST00000618944	PTTG3P	Q9NZH4	202 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	HRH3	Q9Y5N1	445 aa		10.05	□□□□□ -0.8
TP53-223	ENST00000618944	MRPS18B	Q9Y676	258 aa	Known RBP	10.05	□□□□□ -0.8
TP53-223	ENST00000618944	LOC100289279	A0A1B0GTE1	492 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	FTCDNL1	E5RQL4	147 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	NPIPA5	E9PKD4	350 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	SLC17A2	O00624	439 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	OR2T1	O43869	369 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	PRSS3	P35030	304 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	MNDA	P41218	407 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	AFF3	P51826	1226 aa	Known RBP	10.04	□□□□□ -0.8
TP53-223	ENST00000618944	POU3F1	Q03052	451 aa	Predicted RBP	10.04	□□□□□ -0.8
TP53-223	ENST00000618944	ROM1	Q03395	351 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	C19orf57	Q0VDD7	668 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	C2orf68	Q2NKX9	166 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	ESCO2	Q56NI9	601 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	ZNF574	Q6ZN55	896 aa	Predicted RBP	10.04	□□□□□ -0.8
TP53-223	ENST00000618944	CATSPERD	Q86XM0	798 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	JAGN1	Q8N5M9	183 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	APCDD1L	Q8NCL9	501 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	PLPP5	Q8NEB5	264 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	OR5M1	Q8NGP8	315 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	OR13C3	Q8NGS6	347 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	OR52N5	Q8NH56	324 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	STK35	Q8TDR2	534 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	CHST6	Q9GZX3	395 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	GPN1	Q9HCN4	374 aa	Predicted RBP	10.04	□□□□□ -0.8
TP53-223	ENST00000618944	CKLF	Q9UBR5	152 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	NPIPA1	Q9UND3	350 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	CRABP1	P29762	137 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	DNASE1L1	P49184	302 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	WDR45B	Q5MNZ6	344 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	FAM69B	Q5VUD6	431 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	ZNF626	Q68DY1	528 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	DNM1P46	Q6ZS02	220 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	ANKRD37	Q7Z713	158 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	TMEM234	Q8WY98	164 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	NKD1	Q969G9	470 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	C5orf34	Q96MH7	638 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	OR6C1	Q96RD1	312 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	TMEM185B	Q9H7F4	350 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	UBE2Z	Q9H832	354 aa	Predicted RBP	10.04	□□□□□ -0.8
TP53-223	ENST00000618944	EMC3	Q9P0I2	261 aa		10.04	□□□□□ -0.8
TP53-223	ENST00000618944	TRBV11-1	A0A0K0K1C0	115 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	TMEM269	A0A1B0GVZ9	245 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944		A0A1W2PPC1	479 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	HSPB2	A8KAH6	182 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	CD2	P06729	351 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	HTR2C	P28335	458 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	FAU	P35544	74 aa	Known RBP	10.03	□□□□□ -0.8
TP53-223	ENST00000618944	TLE3	Q04726	772 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	C17orf67	Q0P5P2	114 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	INPP5J	Q15735	1006 aa	Predicted RBP	10.03	□□□□□ -0.8
TP53-223	ENST00000618944	HSPB2	Q16082	182 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	H1FNT	Q75WM6	255 aa	Predicted RBP	10.03	□□□□□ -0.8
TP53-223	ENST00000618944	SLC25A28	Q96A46	364 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	RBP7	Q96R05	134 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	CMKLR1	Q99788	373 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	OR52A1	Q9UKL2	312 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	MRPS17	Q9Y2R5	130 aa	Known RBP	10.03	□□□□□ -0.8
TP53-223	ENST00000618944	VPS13A	Q96RL7	3174 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	LOC105371267	A0A1B0GV96	52 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944		M0R233	179 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	P2RY10	O00398	339 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	CSF1	P09603	554 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	CXCL2	P19875	107 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	FOXK1	P85037	733 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	FOXF1	Q12946	379 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	RBMS2	Q15434	407 aa	Known RBP	10.03	□□□□□ -0.8
TP53-223	ENST00000618944	NKAIN1	Q4KMZ8	207 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	GLT8D1	Q68CQ7	371 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	SLC36A1	Q7Z2H8	476 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	CDH24	Q86UP0	819 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	10.03	□□□□□ -0.8
TP53-223	ENST00000618944	SLC26A10	Q8NG04	563 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	ASB10	Q8WXI3	467 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	MED30	Q96HR3	178 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	ZNF768	Q9H5H4	540 aa	Known RBP	10.03	□□□□□ -0.8
TP53-223	ENST00000618944	FSCN3	Q9NQT6	498 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944		R4GMQ9	66 aa		10.03	□□□□□ -0.8
TP53-223	ENST00000618944	DMD	P11532	3685 aa		10.02	□□□□□ -0.81
TP53-223	ENST00000618944	LOC107986453	A0A1B0GWG9	222 aa		10.02	□□□□□ -0.81
TP53-223	ENST00000618944	ANKUB1	A6NFN9	424 aa		10.02	□□□□□ -0.81
TP53-223	ENST00000618944		M0QYG6	137 aa		10.02	□□□□□ -0.81
TP53-223	ENST00000618944	EFNA2	O43921	213 aa		10.02	□□□□□ -0.81
TP53-223	ENST00000618944	IL5	P05113	134 aa		10.02	□□□□□ -0.81
TP53-223	ENST00000618944	DCN	P07585	359 aa	Known RBP	10.02	□□□□□ -0.81
TP53-223	ENST00000618944	AKAIN1	P0CW23	69 aa		10.02	□□□□□ -0.81
TP53-223	ENST00000618944	HSF1	Q00613	529 aa		10.02	□□□□□ -0.81
TP53-223	ENST00000618944	OPCML	Q14982	345 aa		10.02	□□□□□ -0.81
TP53-223	ENST00000618944	SHB	Q15464	509 aa		10.02	□□□□□ -0.81
TP53-223	ENST00000618944	FAM166A	Q6J272	317 aa		10.02	□□□□□ -0.81
TP53-223	ENST00000618944	WDR74	Q6RFH5	385 aa	Predicted RBP	10.02	□□□□□ -0.81
TP53-223	ENST00000618944	PRSS42	Q7Z5A4	293 aa		10.02	□□□□□ -0.81
TP53-223	ENST00000618944	SPIC	Q8N5J4	248 aa		10.02	□□□□□ -0.81
TP53-223	ENST00000618944	NFAM1	Q8NET5	270 aa	Predicted RBP	10.02	□□□□□ -0.81
TP53-223	ENST00000618944	ELMOD3	Q96FG2	381 aa		10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms