RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 GRINAQ7Z429 371 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 NOXA1Q86UR1 476 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 ZNF440Q8IYI8 595 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 ATG16L2Q8NAA4 619 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 ATP6V1C2Q8NEY4 427 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 OR5D16Q8NGK9 328 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 OR5AK3PQ8NH89 298 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 XAGE5Q8WWM1 108 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 EDARADDQ8WWZ3 215 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 FAM168AQ92567 244 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 ROPN1LQ96C74 230 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 ZHX1-C8orf76Q96EF9 292 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 ST6GAL2Q96JF0 529 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 PPP1R36Q96LQ0 422 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 ZBTB18Q99592 522 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 KLHDC3Q9BQ90 382 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 CHCHD6Q9BRQ6 235 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 THUMPD3Q9BV44 507 aaKnown RBP7.51□□□□□ -1.21
GPC6-202ENST00000617456 SRXN1Q9BYN0 137 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 DNTTIP1Q9H147 329 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 OR51I1Q9H343 314 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 COQ10BQ9H8M1 238 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 SEPSECSQ9HD40 501 aaKnown RBP7.51□□□□□ -1.21
GPC6-202ENST00000617456 KCNK9Q9NPC2 374 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 AIG1Q9NVV5 245 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 BABAM2Q9NXR7 383 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 CALML5Q9NZT1 146 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 MARCOQ9UEW3 520 aaPredicted RBP7.51□□□□□ -1.21
GPC6-202ENST00000617456 KCNE5Q9UJ90 142 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 MKLN1Q9UL63 735 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 KCNS2Q9ULS6 477 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 MGAT4AQ9UM21 535 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 MYRFQ9Y2G1 1151 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 GPR45Q9Y5Y3 372 aa7.51□□□□□ -1.21
GPC6-202ENST00000617456 YLPM1P49750 1951 aaKnown RBP7.5□□□□□ -1.21
GPC6-202ENST00000617456 CCDC154A6NI56 674 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 AGAP5A6NIR3 686 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 ELOA3DA6NLF2 546 aaPredicted RBP7.5□□□□□ -1.21
GPC6-202ENST00000617456 C9JVG2 144 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 SULT2B1O00204 365 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 HMGN4O00479 90 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 PHYHO14832 338 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 MFN2O95140 757 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 BCL10O95999 233 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 DBIP07108 87 aaKnown RBP7.5□□□□□ -1.21
GPC6-202ENST00000617456 OR12D1P0DN82 309 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 SLC25A16P16260 332 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 BGNP21810 368 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 CHI3L1P36222 383 aaPredicted RBP7.5□□□□□ -1.21
GPC6-202ENST00000617456 MRPL19P49406 292 aaKnown RBP7.5□□□□□ -1.21
GPC6-202ENST00000617456 UGT2B15P54855 530 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 H3F3AP84243 136 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 RASGEF1BQ0VAM2 473 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 GAGE1Q13065 139 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 TOMM34Q15785 309 aaPredicted RBP7.5□□□□□ -1.21
GPC6-202ENST00000617456 ELOA3BQ3SY89 546 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 FAM174BQ3ZCQ3 159 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 RNF212Q495C1 297 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 HSD17B12Q53GQ0 312 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 SYT14P1Q58G82 188 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 ARMCX4Q5H9R4 360 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 PABPC1L2AQ5JQF8 200 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 SPANXN4Q5MJ08 99 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 TIMM23BQ5SRD1 257 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 FAM120AOSQ5T036 256 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 PRAMEF8Q5VWM4 474 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 PRAMEF7Q5VXH5 474 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 STEAP3Q658P3 488 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 FRRS1Q6ZNA5 592 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 DCXRQ7Z4W1 244 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 CLECL1Q8IZS7 167 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 ELOA3Q8NG57 546 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 OR1M1Q8NGA1 313 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 ZNF775Q96BV0 537 aaPredicted RBP7.5□□□□□ -1.21
GPC6-202ENST00000617456 BOD1Q96IK1 185 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 PANX1Q96RD7 426 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 VRK1Q99986 396 aaPredicted RBP7.5□□□□□ -1.21
GPC6-202ENST00000617456 SLC35A5Q9BS91 424 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 OR51B6Q9H340 312 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 SAV1Q9H4B6 383 aaPredicted RBP7.5□□□□□ -1.21
GPC6-202ENST00000617456 OPA3Q9H6K4 179 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 PARPBPQ9NWS1 579 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 CHRNA9Q9UGM1 479 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 PRSS50Q9UI38 385 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 DCTN4Q9UJW0 460 aa7.5□□□□□ -1.21
GPC6-202ENST00000617456 ING1Q9UK53 422 aaPredicted RBP7.5□□□□□ -1.21
GPC6-202ENST00000617456 A0A096LPI6 279 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 IGHV3-15A0A0B4J1V0 119 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 LOC100289279A0A1B0GTE1 492 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 A0A1W2PN81 502 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 SLC35F4A4IF30 521 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 RFPL4AA6NLU0 287 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 ZNF814B7Z6K7 855 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 KRBOX1C9JBD0 128 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 E7EQL1 145 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 RFPL4AL1F8VTS6 287 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 SDHDO14521 159 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 SMAD9O15198 467 aaKnown RBP7.49□□□□□ -1.21
GPC6-202ENST00000617456 OIP5O43482 229 aa7.49□□□□□ -1.21
GPC6-202ENST00000617456 SGCEO43556 437 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms