RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 PRKRAO75569 313 aaKnown RBP11.61□□□□□ -0.55
TCF4-248ENST00000616053 CNMDO75829 334 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 HOXC13P31276 330 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 CNN1P51911 297 aaKnown RBP11.61□□□□□ -0.55
TCF4-248ENST00000616053 HERVK_113P61574 105 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 PAX5Q02548 391 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 ZNF766Q5HY98 468 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 Q6ZN92 141 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 IRF2BP2Q7Z5L9 587 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 CLECL1Q8IZS7 167 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 LILRA2Q8N149 483 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 SIGLECL1Q8N7X8 197 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 TRAV36DV7A0A075B6V5 113 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 P2RY10O00398 339 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 CBR1P16152 277 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 APOBEC3GQ9HC16 384 aaKnown RBP11.61□□□□□ -0.55
TCF4-248ENST00000616053 CES1P1Q9UKY3 287 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 ASB4Q9Y574 426 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 TIMM10BQ9Y5J6 103 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 ARHGAP33O14559 1287 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 MT-ND4LP03901 98 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 TM4SF1P30408 202 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 P2RX3P56373 397 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 GLYR1Q49A26 553 aaPredicted RBP11.61□□□□□ -0.55
TCF4-248ENST00000616053 LRRC55Q6ZSA7 311 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 ETFBKMTQ8IXQ9 262 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 WDR13Q9H1Z4 485 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 C1GALT1Q9NS00 363 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 BOLA1Q9Y3E2 137 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 KLK4Q9Y5K2 254 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 FAM24AA6NFZ4 105 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 IHHQ14623 411 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 GUK1Q16774 197 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 ACOT6Q3I5F7 207 aaPredicted RBP11.61□□□□□ -0.55
TCF4-248ENST00000616053 CMPK2Q5EBM0 449 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 FDX2Q6P4F2 183 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 NETO1Q8TDF5 533 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 TMED6Q8WW62 240 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 EDARADDQ8WWZ3 215 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 TAAR6Q96RI8 345 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 UCK1Q9HA47 277 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 DSCR3O14972 297 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 ZNF324O75467 553 aaPredicted RBP11.61□□□□□ -0.55
TCF4-248ENST00000616053 SNRPGP62308 76 aaKnown RBP11.61□□□□□ -0.55
TCF4-248ENST00000616053 SEMA3BQ13214 749 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 HTR4Q13639 388 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 ZNF181Q2M3W8 571 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 RHNO1Q9BSD3 238 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 EVA1AQ9H8M9 152 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 PBRM1Q86U86 1689 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 LSM11P83369 360 aaKnown RBP eCLIP11.6□□□□□ -0.55
TCF4-248ENST00000616053 H3F3AP84243 136 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 ZNF252P-AS1Q0IIN9 211 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 RTL10Q7L3V2 364 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 GRINAQ7Z429 371 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 OR51F2Q8NH61 342 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 TTC9Q92623 222 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 CACNA1GO43497 2377 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 ZNF93P35789 620 aaPredicted RBP11.6□□□□□ -0.55
TCF4-248ENST00000616053 ETV6P41212 452 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 FAM109BQ6ICB4 259 aaPredicted RBP11.6□□□□□ -0.55
TCF4-248ENST00000616053 MED25Q71SY5 747 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 OR10P1Q8NGE3 313 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 CXorf58Q96LI9 332 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 ZDHHC11Q9H8X9 412 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 AIG1Q9NVV5 245 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 A0A0B4J2A0 478 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 HCRTO43612 131 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 CTXN2P0C2S0 81 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 UBBP0CG47 229 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 PAFAH1B3Q15102 231 aaKnown RBP11.6□□□□□ -0.55
TCF4-248ENST00000616053 RPE65Q16518 533 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 PTPMT1Q8WUK0 201 aaPredicted RBP11.6□□□□□ -0.55
TCF4-248ENST00000616053 CLEC4DQ8WXI8 215 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 SHPKQ9UHJ6 478 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 TRGV5A0A0B4J1U4 118 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 OSMP13725 252 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 TNFRSF1BP20333 461 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 NUBP1P53384 320 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 LSAMPQ13449 338 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 GGTLC2Q14390 218 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 FGFBP1Q14512 234 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 TXNRD3NBQ6F5E7 133 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 LRRTM1Q86UE6 522 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 PLPP7Q8NBV4 271 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 OR8B4Q96RC9 309 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 TAAR9Q96RI9 348 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 TCEAL7Q9BRU2 100 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 C1QTNF2Q9BXJ5 285 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 OSGIN1Q9UJX0 560 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 TAGLN2P37802 199 aaKnown RBP11.6□□□□□ -0.55
TCF4-248ENST00000616053 MRPS10P82664 201 aaKnown RBP11.6□□□□□ -0.55
TCF4-248ENST00000616053 ZXDBP98169 803 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 FITM2Q8N6M3 262 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 RDH5Q92781 318 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 GPR173Q9NS66 373 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 TEX50A0A1B0GTY4 177 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 ICMTO60725 284 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 HOXC4P09017 264 aaPredicted RBP11.6□□□□□ -0.55
TCF4-248ENST00000616053 KIR3DL2P43630 455 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms