RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 OR52D1Q9H346 318 aa1.88□□□□□ -2.11
HDDC2-207ENST00000608532 TRMT112Q9UI30 125 aaKnown RBP1.88□□□□□ -2.11
HDDC2-207ENST00000608532 TSSC4Q9Y5U2 329 aaPredicted RBP1.88□□□□□ -2.11
HDDC2-207ENST00000608532 SHROOM3Q8TF72 1996 aa1.88□□□□□ -2.11
HDDC2-207ENST00000608532 IGHV1OR15-9A0A0B4J2B8 117 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 C5orf63A6NC05 138 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 DNASE2O00115 360 aaPredicted RBP1.87□□□□□ -2.11
HDDC2-207ENST00000608532 HAS3O00219 553 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 DPM1O60762 260 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 ZNF688P0C7X2 276 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 CEACAM3P40198 252 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 GDI2P50395 445 aaKnown RBP1.87□□□□□ -2.11
HDDC2-207ENST00000608532 PRMT2P55345 433 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 UBE2NP61088 152 aaKnown RBP1.87□□□□□ -2.11
HDDC2-207ENST00000608532 IMMTQ16891 758 aaKnown RBP1.87□□□□□ -2.11
HDDC2-207ENST00000608532 ATAD3BQ5T9A4 648 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 CDKL3Q8IVW4 592 aaPredicted RBP1.87□□□□□ -2.11
HDDC2-207ENST00000608532 EID2Q8N6I1 236 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 ST20-AS1Q8NBB2 130 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 GMCL1P1Q8NEA9 526 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 OR1L6Q8NGR2 347 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 RHEBL1Q8TAI7 183 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 C12orf42Q96LP6 360 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 ERP44Q9BS26 406 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 C1orf198Q9H425 327 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 PEX16Q9Y5Y5 336 aa1.87□□□□□ -2.11
HDDC2-207ENST00000608532 SCN1AP35498 2009 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 ZNF816-ZNF321PA0A0X1KG74 233 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 BTBD17A6NE02 478 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 ZNF98A6NK75 572 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 PCP4L1A6NKN8 68 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 SNTNA6NMZ2 147 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 H0YJW9 148 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 GMFGO60234 142 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 TSPAN12O95859 305 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 OR8U9P0C7N5 309 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 ATP1B2P14415 290 aaPredicted RBP1.86□□□□□ -2.11
HDDC2-207ENST00000608532 TNFSF9P41273 254 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 CCNG1P51959 295 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 YWHAGP61981 247 aaKnown RBP eCLIP1.86□□□□□ -2.11
HDDC2-207ENST00000608532 PDK3Q15120 406 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 PMF1Q6P1K2 205 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 SPINT4Q6UDR6 99 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 CCDC73Q6ZRK6 1079 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 SLC25A48Q6ZT89 311 aaKnown RBP1.86□□□□□ -2.11
HDDC2-207ENST00000608532 SLC16A13Q7RTY0 426 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 TMEM256Q8N2U0 113 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 SDR9C7Q8NEX9 313 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 OR4F6Q8NGB9 312 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 C17orf50Q8WW18 174 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 ZCCHC13Q8WW36 166 aaKnown RBP1.86□□□□□ -2.11
HDDC2-207ENST00000608532 ST3GAL6Q9Y274 331 aa1.86□□□□□ -2.11
HDDC2-207ENST00000608532 DDX49Q9Y6V7 483 aaKnown RBP1.86□□□□□ -2.11
HDDC2-207ENST00000608532 CNTNAP1P78357 1384 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 CENPVL3A0A0U1RRI6 287 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 OR6C74A6NCV1 312 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 GPR89AB7ZAQ6 455 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 SOCS1O15524 211 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 GPR89BP0CG08 455 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 GPX6P59796 221 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 RBX1P62877 108 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 MXD1Q05195 221 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 MPV17L2Q567V2 206 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 LIX1Q8N485 282 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 C1orf64Q8NEQ6 169 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 OR6N1Q8NGY5 312 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 PTX4Q96A99 478 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 MRGPRFQ96AM1 343 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 SHANK2-AS3Q9BTD1 123 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 FRMD8P1Q9BZ68 369 aaPredicted RBP1.85□□□□□ -2.11
HDDC2-207ENST00000608532 CWH43Q9H720 699 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 ING4Q9UNL4 249 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 ATP6V0A2Q9Y487 856 aa1.85□□□□□ -2.11
HDDC2-207ENST00000608532 SEC16AO15027 2179 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 A0A1W2PPV9 198 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 CHST10O43529 356 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 OR5H8P0DN80 308 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 ETS2P15036 469 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 WARSP23381 471 aaKnown RBP1.84□□□□□ -2.11
HDDC2-207ENST00000608532 F2RP25116 425 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 TAS2R31P59538 309 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 RPS11P62280 158 aaKnown RBP eCLIP1.84□□□□□ -2.11
HDDC2-207ENST00000608532 FUT5Q11128 374 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 RCAN2Q14206 197 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 H2BFWTQ7Z2G1 175 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 PDIK1LQ8N165 341 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 APCDD1LQ8NCL9 501 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 OR5M1Q8NGP8 315 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 ANGPTL4Q9BY76 406 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 FGF23Q9GZV9 251 aaPredicted RBP1.84□□□□□ -2.11
HDDC2-207ENST00000608532 DHX35Q9H5Z1 703 aaKnown RBP1.84□□□□□ -2.11
HDDC2-207ENST00000608532 SAMSN1Q9NSI8 373 aaKnown RBP1.84□□□□□ -2.11
HDDC2-207ENST00000608532 CLEC4AQ9UMR7 237 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 CBY1Q9Y3M2 126 aa1.84□□□□□ -2.11
HDDC2-207ENST00000608532 IGHV3OR16-8A0A075B7F1 116 aa1.83□□□□□ -2.12
HDDC2-207ENST00000608532 C15orf38-AP3S2A0A0A6YYH1 394 aa1.83□□□□□ -2.12
HDDC2-207ENST00000608532 TRAV19A0A0A6YYK7 116 aa1.83□□□□□ -2.12
HDDC2-207ENST00000608532 A0A1W2PNN7 141 aa1.83□□□□□ -2.12
HDDC2-207ENST00000608532 TMEM120BA0PK00 339 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms