RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 PNMA6AP0CW24 399 aaPredicted RBP3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 DAOP14920 347 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 ABOP16442 354 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 PMCHP20382 165 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 UGT1A4P22310 534 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 SLC1A1P43005 524 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 CSRP3P50461 194 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 DAP3P51398 398 aaKnown RBP3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 CCNHP51946 323 aaPredicted RBP3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 NDUFA8P51970 172 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 ARHGDIBP52566 201 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 CRYBA2P53672 197 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 FOXG1P55316 489 aaPredicted RBP3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 ARPP19P56211 112 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 PEX3P56589 373 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 OR2B6P58173 313 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 UBE2MP61081 183 aaKnown RBP3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 RPS15AP62244 130 aaKnown RBP3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 MRPS22P82650 360 aaKnown RBP3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 TWF1Q12792 350 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 UPP1Q16831 310 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 DGUOKQ16854 277 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 GTDC1Q4AE62 458 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 FAM199XQ6PEV8 388 aaPredicted RBP3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 ZNF600Q6ZNG1 722 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 TIPARPQ7Z3E1 657 aaKnown RBP3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 ABHD12BQ7Z5M8 362 aaPredicted RBP3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 CCDC65Q8IXS2 484 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 IQCKQ8N0W5 287 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 JAGN1Q8N5M9 183 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 OR2T33Q8NG76 320 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 OR5T2Q8NGG2 359 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 OR10G8Q8NGN5 311 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 OR9A4Q8NGU2 314 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 FNDC8Q8TC99 324 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 ZPLD1Q8TCW7 415 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 TCP10LQ8TDR4 215 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 PCNPQ8WW12 178 aaKnown RBP3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 FAM131CQ96AQ9 280 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 CCDC124Q96CT7 223 aaKnown RBP3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 ECHDC3Q96DC8 303 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 CCDC126Q96EE4 140 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 CEP170P1Q96L14 293 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 C9orf72Q96LT7 481 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 ECSITQ9BQ95 431 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 UCK1Q9HA47 277 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 FGF20Q9NP95 211 aaPredicted RBP3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 IL1RAPQ9NPH3 570 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 CLEC5AQ9NY25 188 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 SEC14L4Q9UDX3 406 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 MRM2Q9UI43 246 aaKnown RBP3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 SCML1Q9UN30 329 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 SLC17A4Q9Y2C5 497 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 NTNG1Q9Y2I2 539 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 KCNIP3Q9Y2W7 256 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 CACNA1DQ01668 2161 aa3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 PHF3Q92576 2039 aaKnown RBP3.22□□□□□ -1.89
IGHV3-29-201ENST00000604817 PCDH15Q96QU1 1955 aa3.21□□□□□ -1.89
IGHV3-29-201ENST00000604817 TSC2P49815 1807 aa3.21□□□□□ -1.89
IGHV3-29-201ENST00000604817 KIAA1549LQ6ZVL6 1849 aa3.21□□□□□ -1.89
IGHV3-29-201ENST00000604817 CITO14578 2027 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 IQANK1A0A1B0GTG1 560 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 RNF212BA8MTL3 300 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 IDSB3KWA1 339 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 TRDCB7Z8K6 153 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 C11orf98E9PRG8 122 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 GFYI3L273 518 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 GOLGA8RI6L899 631 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 K7EQS6 105 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 UGT2B17O75795 530 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 FARS2O95363 451 aaKnown RBP3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 NADKO95544 446 aaPredicted RBP3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 IGKV2-30P06310 120 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 WNT2P09544 360 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 HLA-EP13747 358 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 CTRB1P17538 263 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 COX5AP20674 150 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 GABRR2P28476 465 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 FGF9P31371 208 aaPredicted RBP3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 RPL9P32969 192 aaKnown RBP3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 ARL2P36404 184 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 DDOSTP39656 456 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 KPNA2P52292 529 aaKnown RBP3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 CRISP1P54107 249 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 UCNP55089 124 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 ZNF154Q13106 437 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 PIGHQ14442 188 aaPredicted RBP3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 MTF1Q14872 753 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 PDGFRLQ15198 375 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 TSC22D1Q15714 1073 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 TRIM16LQ309B1 348 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 ZNF672Q499Z4 452 aaPredicted RBP3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 EIPR1Q53HC9 387 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 CARD16Q5EG05 197 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 WDR38Q5JTN6 314 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 LINC00242Q5T6M2 205 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 SEL1L2Q5TEA6 688 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 CTRB2Q6GPI1 263 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 ZNF549Q6P9A3 640 aa3.21□□□□□ -1.9
IGHV3-29-201ENST00000604817 ALKAL1Q6UXT8 129 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms