RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 POM121L2Q96KW2 1035 aa18.8■□□□□ 0.6
PPFIA3-208ENST00000602726 LRGUKQ96M69 825 aa18.8■□□□□ 0.6
PPFIA3-208ENST00000602726 FOXN4Q96NZ1 517 aa18.8■□□□□ 0.6
PPFIA3-208ENST00000602726 WACQ9BTA9 647 aa18.8■□□□□ 0.6
PPFIA3-208ENST00000602726 WNT5BQ9H1J7 359 aa18.8■□□□□ 0.6
PPFIA3-208ENST00000602726 OR52D1Q9H346 318 aa18.8■□□□□ 0.6
PPFIA3-208ENST00000602726 TPK1Q9H3S4 243 aa18.8■□□□□ 0.6
PPFIA3-208ENST00000602726 MAGIXQ9H6Y5 334 aa18.8■□□□□ 0.6
PPFIA3-208ENST00000602726 EMC7Q9NPA0 242 aa18.8■□□□□ 0.6
PPFIA3-208ENST00000602726 VSX1Q9NZR4 365 aaPredicted RBP18.8■□□□□ 0.6
PPFIA3-208ENST00000602726 INAFM1C9JVW0 142 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 SCG5P05408 212 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 IGFBP1P08833 259 aaPredicted RBP18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 USF1P22415 310 aaPredicted RBP18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 MAGEA2P43356 314 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 GSSP48637 474 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 HMGA2P52926 109 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 MAD2L1BPQ15013 274 aaPredicted RBP18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 FAM98BQ52LJ0 330 aaKnown RBP18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 ZNF774Q6NX45 483 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 PGBD2Q6P3X8 592 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 UGT2A3Q6UWM9 527 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 UNQ6126/PRO20091Q6UXV3 157 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 PTCHD4Q6ZW05 846 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 GLB1L2Q8IW92 636 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 LINC00471Q8N535 108 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 SYNPRQ8TBG9 265 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 CCDC124Q96CT7 223 aaKnown RBP18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 ASB9Q96DX5 294 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 THTPAQ9BU02 230 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 IFT27Q9BW83 186 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 MYEF2Q9P2K5 600 aaKnown RBP18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 GPR160Q9UJ42 338 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 LYVE1Q9Y5Y7 322 aa18.79■□□□□ 0.6
PPFIA3-208ENST00000602726 LOC100509620A0A075B734 347 aa18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 IMPA2O14732 288 aa18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 CDKN2AP42771 156 aaKnown RBP18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 NR4A2P43354 598 aa18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 KLF3P57682 345 aaPredicted RBP18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 ERVS71-1P61550 626 aa18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 TSPAN31Q12999 210 aa18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 NKPD1Q17RQ9 610 aa18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 TMEM249Q2WGJ8 235 aa18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 JAZF1Q86VZ6 243 aa18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 ZNF540Q8NDQ6 660 aa18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 OR1J1Q8NGS3 322 aa18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 CLPTM1LQ96KA5 538 aa18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 SAMD8Q96LT4 415 aa18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 TRIM15Q9C019 465 aa18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 NUAK2Q9H093 628 aa18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 COA3Q9Y2R0 106 aaPredicted RBP18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 JMJD1CQ15652 2540 aa18.78■□□□□ 0.6
PPFIA3-208ENST00000602726 VWC2LB2RUY7 222 aa18.77■□□□□ 0.6
PPFIA3-208ENST00000602726 ARPC3O15145 178 aa18.77■□□□□ 0.6
PPFIA3-208ENST00000602726 CD5LO43866 347 aa18.77■□□□□ 0.6
PPFIA3-208ENST00000602726 CLPTM1O96005 669 aa18.77■□□□□ 0.6
PPFIA3-208ENST00000602726 ZNF250P15622 560 aa18.77■□□□□ 0.6
PPFIA3-208ENST00000602726 NOS3P29474 1203 aa18.77■□□□□ 0.6
PPFIA3-208ENST00000602726 SCRN3Q0VDG4 424 aa18.77■□□□□ 0.6
PPFIA3-208ENST00000602726 GGTLC2Q14390 218 aa18.77■□□□□ 0.6
PPFIA3-208ENST00000602726 DNM1P34Q6PK57 102 aa18.77■□□□□ 0.6
PPFIA3-208ENST00000602726 UBASH3BQ8TF42 649 aa18.77■□□□□ 0.6
PPFIA3-208ENST00000602726 TAAR3PQ9P1P4 343 aa18.77■□□□□ 0.6
PPFIA3-208ENST00000602726 TLX2O43763 284 aaPredicted RBP18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 UBOX5O94941 541 aa18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 CCNB2O95067 398 aa18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 RENP00797 406 aa18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 CRABP1P29762 137 aa18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 WNT5AP41221 380 aa18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 CENPAP49450 140 aa18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 ALKBH6Q3KRA9 238 aa18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 LEG1Q6P5S2 330 aa18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 ZNF620Q6ZNG0 422 aa18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 ZNF101Q8IZC7 436 aa18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 ZNF786Q8N393 782 aa18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 OR9Q2Q8NGE9 314 aa18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 OR4C15Q8NGM1 316 aa18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 YAE1D1Q9NRH1 226 aa18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 SLCO1C1Q9NYB5 712 aa18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 NDRG4Q9ULP0 352 aaKnown RBP18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 CHD3Q12873 2000 aaKnown RBP18.76■□□□□ 0.59
PPFIA3-208ENST00000602726 IGLV3-9A0A075B6K5 115 aa18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 GYG2O15488 501 aa18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 IDH3BO43837 385 aa18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 MPZL1O95297 269 aa18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 NAT2P11245 290 aa18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 HIST1H1CP16403 213 aaKnown RBP18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 LSM6P62312 80 aaKnown RBP18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 TRAP1Q12931 704 aaKnown RBP18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 PPP1R8Q12972 351 aaKnown RBP18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 AQP6Q13520 282 aa18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 MOGQ16653 247 aa18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 ZNF718Q3SXZ3 478 aa18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 OR2T5Q6IEZ7 315 aa18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 ARL9Q6T311 187 aa18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 OR2T29Q8NH02 315 aa18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 OR4K13Q8NH42 304 aa18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 SNX33Q8WV41 574 aa18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 TSSK2Q96PF2 358 aa18.75■□□□□ 0.59
PPFIA3-208ENST00000602726 NMNAT3Q96T66 252 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms