RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 NELFAQ9H3P2 528 aa20.58■□□□□ 0.88
SYMPK-212ENST00000598896 SLC7A10Q9NS82 523 aa20.58■□□□□ 0.88
SYMPK-212ENST00000598896 PARPBPQ9NWS1 579 aa20.58■□□□□ 0.88
SYMPK-212ENST00000598896 GTF3C1Q12789 2109 aa20.57■□□□□ 0.88
SYMPK-212ENST00000598896 A0A1W2PPW3 197 aa20.57■□□□□ 0.88
SYMPK-212ENST00000598896 METTL15A6NJ78 407 aa20.57■□□□□ 0.88
SYMPK-212ENST00000598896 SULT1C4O75897 302 aa20.57■□□□□ 0.88
SYMPK-212ENST00000598896 KRT8P05787 483 aa20.57■□□□□ 0.88
SYMPK-212ENST00000598896 ROM1Q03395 351 aa20.57■□□□□ 0.88
SYMPK-212ENST00000598896 ACSF3Q4G176 576 aaPredicted RBP20.57■□□□□ 0.88
SYMPK-212ENST00000598896 P4HA3Q7Z4N8 544 aa20.57■□□□□ 0.88
SYMPK-212ENST00000598896 ASB17Q8WXJ9 295 aa20.57■□□□□ 0.88
SYMPK-212ENST00000598896 BCL7BQ9BQE9 202 aa20.57■□□□□ 0.88
SYMPK-212ENST00000598896 PRORYQ9H606 182 aa20.57■□□□□ 0.88
SYMPK-212ENST00000598896 PSMA1P25786 263 aaKnown RBP20.56■□□□□ 0.88
SYMPK-212ENST00000598896 GABRA5P31644 462 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 CAPZA2P47755 286 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 TDGF1P3P51864 188 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 GBX2P52951 348 aaPredicted RBP20.56■□□□□ 0.88
SYMPK-212ENST00000598896 TAS2R43P59537 309 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 SIRPAP78324 504 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 SGCAQ16586 387 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 DMKNQ6E0U4 476 aaPredicted RBP20.56■□□□□ 0.88
SYMPK-212ENST00000598896 ZNF585AQ6P3V2 769 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 ARL9Q6T311 187 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 CFAP77Q6ZQR2 320 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 FAM220AQ7Z4H9 259 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 KCTD20Q7Z5Y7 419 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 YIPF7Q8N8F6 280 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 NDNFQ8TB73 568 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 PGLYRP3Q96LB9 341 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 DCLRE1CQ96SD1 692 aaKnown RBP20.56■□□□□ 0.88
SYMPK-212ENST00000598896 ZNF416Q9BWM5 594 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 LINC00470Q9BZP3 86 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 GPR35Q9HC97 309 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 GP6Q9HCN6 339 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 ASH2LQ9UBL3 628 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 STUB1Q9UNE7 303 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 TLN1Q9Y490 2541 aaKnown RBP20.56■□□□□ 0.88
SYMPK-212ENST00000598896 AHRRA9YTQ3 701 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 PLPP2O43688 288 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 RPP14O95059 124 aaKnown RBP20.56■□□□□ 0.88
SYMPK-212ENST00000598896 MSR1P21757 451 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 ZNF84P51523 738 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 NANOS3P60323 173 aaKnown RBP20.56■□□□□ 0.88
SYMPK-212ENST00000598896 ROR2Q01974 943 aaKnown RBP20.56■□□□□ 0.88
SYMPK-212ENST00000598896 CEACAM16Q2WEN9 425 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 KRTCAP3Q53RY4 240 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 PRR30Q53SZ7 412 aaPredicted RBP20.56■□□□□ 0.88
SYMPK-212ENST00000598896 ZNF679Q8IYX0 411 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 GCNT2Q8N0V5 402 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 OR10S1Q8NGN2 331 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 CPT1CQ8TCG5 803 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 APH1AQ96BI3 265 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 GMPPAQ96IJ6 420 aaPredicted RBP20.56■□□□□ 0.88
SYMPK-212ENST00000598896 MYCBPQ99417 103 aaPredicted RBP20.56■□□□□ 0.88
SYMPK-212ENST00000598896 DCUN1D5Q9BTE7 237 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 TMED9Q9BVK6 235 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 ELOVL3Q9HB03 270 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 B3GAT2Q9NPZ5 323 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 POLR1DQ9Y2S0 133 aa20.56■□□□□ 0.88
SYMPK-212ENST00000598896 ARHGAP21Q5T5U3 1957 aa20.55■□□□□ 0.88
SYMPK-212ENST00000598896 MRPS34P82930 218 aaKnown RBP20.55■□□□□ 0.88
SYMPK-212ENST00000598896 GPR50Q13585 617 aa20.55■□□□□ 0.88
SYMPK-212ENST00000598896 ENDOGQ14249 297 aaKnown RBP20.55■□□□□ 0.88
SYMPK-212ENST00000598896 CDK5R1Q15078 307 aa20.55■□□□□ 0.88
SYMPK-212ENST00000598896 C9orf106Q8NAJ2 232 aa20.55■□□□□ 0.88
SYMPK-212ENST00000598896 KDF1Q8NAX2 398 aaPredicted RBP20.55■□□□□ 0.88
SYMPK-212ENST00000598896 C12orf49Q9H741 205 aa20.55■□□□□ 0.88
SYMPK-212ENST00000598896 GDF2Q9UK05 429 aaPredicted RBP20.55■□□□□ 0.88
SYMPK-212ENST00000598896 NCOA6Q14686 2063 aaPredicted RBP20.55■□□□□ 0.88
SYMPK-212ENST00000598896 TMEM8BA6NDV4 472 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 OGG1O15527 345 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 TMCC2O75069 709 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 SS18L1O75177 396 aaPredicted RBP20.54■□□□□ 0.88
SYMPK-212ENST00000598896 TACSTD2P09758 323 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 FABP5Q01469 135 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 SLC3A1Q07837 685 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 NFATC3Q12968 1075 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 INSL4Q14641 139 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 TIMM50Q3ZCQ8 353 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 OR7E24Q6IFN5 339 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 KCTD18Q6PI47 426 aaPredicted RBP20.54■□□□□ 0.88
SYMPK-212ENST00000598896 LRRC18Q8N456 261 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 SNRNP40Q96DI7 357 aaKnown RBP20.54■□□□□ 0.88
SYMPK-212ENST00000598896 MROQ9BYG7 248 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 TMEM38BQ9NVV0 291 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 LRP12Q9Y561 859 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 DOCK7Q96N67 2140 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 SLC22A1O15245 554 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 B4GALT1P15291 398 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 GUCA1AP43080 201 aaPredicted RBP20.54■□□□□ 0.88
SYMPK-212ENST00000598896 LSM6P62312 80 aaKnown RBP20.54■□□□□ 0.88
SYMPK-212ENST00000598896 GUSBP1Q15486 140 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 CCDC58Q4VC31 144 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 CD200R1LQ6Q8B3 271 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 KRT77Q7Z794 578 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 TEX19Q8NA77 164 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 RNF133Q8WVZ7 376 aa20.54■□□□□ 0.88
SYMPK-212ENST00000598896 SMIM19Q96E16 107 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms