RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 TRIM64A6NGJ6 449 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 TRIM64BA6NI03 449 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 DCTN6O00399 190 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 BHLHE40O14503 412 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 E2F6O75461 281 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 MPZL1O95297 269 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 SOX14O95416 240 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 SNAP29O95721 258 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 IGFBP1P08833 259 aaPredicted RBP11.94□□□□□ -0.5
UPF1-205ENST00000598209 FAM157BP0CG42 384 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 STOMP27105 288 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 CENPAP49450 140 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 NUDT6P53370 316 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 RPS23P62266 143 aaKnown RBP11.94□□□□□ -0.5
UPF1-205ENST00000598209 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.94□□□□□ -0.5
UPF1-205ENST00000598209 MSMPQ1L6U9 139 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 C1orf146Q5VVC0 180 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 OTPQ5XKR4 325 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 CCDC121Q6ZUS5 278 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 OR6V1Q8N148 313 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 SVOPLQ8N434 492 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 OR52E2Q8NGJ4 325 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 MRPL24Q96A35 216 aaKnown RBP11.94□□□□□ -0.5
UPF1-205ENST00000598209 POM121L2Q96KW2 1035 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 WACQ9BTA9 647 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 BDH2Q9BUT1 245 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 TSSK6Q9BXA6 273 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 OR51B6Q9H340 312 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 FN3KQ9H479 309 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 SRA1Q9HD15 236 aaKnown RBP11.94□□□□□ -0.5
UPF1-205ENST00000598209 RPRD1BQ9NQG5 326 aaKnown RBP11.94□□□□□ -0.5
UPF1-205ENST00000598209 PDP1Q9P0J1 537 aaPredicted RBP11.94□□□□□ -0.5
UPF1-205ENST00000598209 DNAJB9Q9UBS3 223 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 B9D1Q9UPM9 204 aa11.94□□□□□ -0.5
UPF1-205ENST00000598209 IGLV1-36A0A0B4J1U3 117 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 OR6C68A6NDL8 312 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 H7C1Q1 480 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 SSX4O60224 188 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 TIPRLO75663 272 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 GPANK1O95872 356 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 TP53P04637 393 aaPredicted RBP11.93□□□□□ -0.5
UPF1-205ENST00000598209 FOSL1P15407 271 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 CCNOP22674 350 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 PCSK6P29122 969 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 GDI2P50395 445 aaKnown RBP11.93□□□□□ -0.5
UPF1-205ENST00000598209 LSM6P62312 80 aaKnown RBP11.93□□□□□ -0.5
UPF1-205ENST00000598209 SCRN3Q0VDG4 424 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 DBPQ10586 325 aaPredicted RBP11.93□□□□□ -0.5
UPF1-205ENST00000598209 COX10Q12887 443 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 ZNF774Q6NX45 483 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 CD300LDQ6UXZ3 194 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 ASRGL1Q7L266 308 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 ALDH16A1Q8IZ83 802 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 HS3ST5Q8IZT8 346 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 LNX2Q8N448 690 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 NPEPL1Q8NDH3 523 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 OR4Q3Q8NH05 313 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 C11orf40Q8WZ69 217 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 C18orf12Q96KH6 178 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 DOK1Q99704 481 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 VRK1Q99986 396 aaPredicted RBP11.93□□□□□ -0.5
UPF1-205ENST00000598209 MRPL37Q9BZE1 423 aaKnown RBP11.93□□□□□ -0.5
UPF1-205ENST00000598209 RACGAP1Q9H0H5 632 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 ARMC1Q9NVT9 282 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 FBXO9Q9UK97 447 aaPredicted RBP11.93□□□□□ -0.5
UPF1-205ENST00000598209 FZR1Q9UM11 496 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 BAIAP2Q9UQB8 552 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 FKBP7Q9Y680 259 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 CR1P17927 2039 aa11.93□□□□□ -0.5
UPF1-205ENST00000598209 LOC100509620A0A075B734 347 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 C5orf49A4QMS7 147 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 DOK2O60496 412 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 DEAF1O75398 565 aaPredicted RBP11.92□□□□□ -0.5
UPF1-205ENST00000598209 CIB2O75838 187 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 LCKP06239 509 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 GAAP10253 952 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 RAD52P43351 418 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 PPOXP50336 477 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 EFNA4P52798 201 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 UCP2P55851 309 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 TNK1Q13470 666 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 AQP6Q13520 282 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 CCNIQ14094 377 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 KCNMB1Q16558 191 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 MEP1BQ16820 701 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 RGS7BPQ6MZT1 257 aaPredicted RBP11.92□□□□□ -0.5
UPF1-205ENST00000598209 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.92□□□□□ -0.5
UPF1-205ENST00000598209 ZBTB46Q86UZ6 589 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 CIARTQ8N365 385 aaPredicted RBP11.92□□□□□ -0.5
UPF1-205ENST00000598209 CYB561A3Q8NBI2 242 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 OR2T33Q8NG76 320 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 TEX47Q8TBZ9 253 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 SORCS2Q96PQ0 1159 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 SYT3Q9BQG1 590 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 DYNLRB1Q9NP97 96 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 ASH2LQ9UBL3 628 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 REV1Q9UBZ9 1251 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 POLR1DQ9Y2S0 133 aa11.92□□□□□ -0.5
UPF1-205ENST00000598209 FAM171A2A8MVW0 826 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 H3BN98 237 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms