RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 OR10H5Q8NGA6 315 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 NMD3Q96D46 503 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 ZMYND19Q96E35 227 aaPredicted RBP10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 RNFT2Q96EX2 444 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 CNN2Q99439 309 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 TEAD3Q99594 435 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 PIGMQ9H3S5 423 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 SEC61A2Q9H9S3 476 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 CRLF2Q9HC73 371 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 GPR35Q9HC97 309 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 AMBNQ9NP70 447 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 KCNJ16Q9NPI9 418 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 SLC7A10Q9NS82 523 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 MALT1Q9UDY8 824 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 PRSS50Q9UI38 385 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 MYRFQ9Y2G1 1151 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 COA3Q9Y2R0 106 aaPredicted RBP10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 PCDHGB5Q9Y5G0 923 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 ARHGAP21Q5T5U3 1957 aa10.59□□□□□ -0.71
SHKBP1-213ENST00000597325 IGKV1D-43A0A0B4J1Z2 117 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 A0A0G2JNJ9 132 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 DCTN6O00399 190 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 XPNPEP2O43895 674 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 TNFSF13O75888 250 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 CNOT4O95628 575 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 IL18BPO95998 194 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 ZNF823P16415 610 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 BMP5P22003 454 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 EEF1B2P24534 225 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 LAP3P28838 519 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 ZNF133P52736 654 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 SH3BGRP55822 239 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 FAPQ12884 760 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 GGTLC2Q14390 218 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 STK11Q15831 433 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 CEACAM16Q2WEN9 425 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 LAIR2Q6ISS4 152 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 LRFN4Q6PJG9 635 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 UGT2A3Q6UWM9 527 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 AHSA2Q719I0 299 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 BTLAQ7Z6A9 289 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 ERI1Q8IV48 349 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 OR51G2Q8NGK0 314 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 IPCEF1Q8WWN9 437 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 TMEM158Q8WZ71 300 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 KISS1RQ969F8 398 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 MYDGFQ969H8 173 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 STARD4Q96DR4 205 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 FOXN4Q96NZ1 517 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 NR1H4Q96RI1 486 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 INTS14Q96SY0 518 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 YTHDF1Q9BYJ9 559 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 CCNB1IP1Q9NPC3 277 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 PLCXD1Q9NUJ7 323 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 CNOT2Q9NZN8 540 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 Q9UFV3 132 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 POLR1DQ9Y2S0 133 aa10.58□□□□□ -0.72
SHKBP1-213ENST00000597325 TVP23AA6NH52 213 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 ZNF99A8MXY4 864 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 EEF1E1-BLOC1S5C9J1V9 151 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 RPL36A-HNRNPH2H7BZ11 118 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 EEF1E1O43324 174 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 FARS2O95363 451 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 FADS2O95864 444 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 MRPL3P09001 348 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 CD8BP10966 210 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 PIPP12273 146 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 CRHBPP24387 322 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 EDNRAP25101 427 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 MPGP29372 298 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 NAA10P41227 235 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 GABARAPL2P60520 117 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 ACTC1P68032 377 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 ACTA1P68133 377 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 TGFBR3Q03167 851 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 HSF2Q03933 536 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 DBPQ10586 325 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 RAB40BQ12829 278 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 ETFDHQ16134 617 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 KCTD21Q4G0X4 260 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 SHEQ5VZ18 495 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 B3GLCTQ6Y288 498 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 Q6ZT83 130 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 BEND4Q6ZU67 534 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 STX19Q8N4C7 294 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 FOXB1Q99853 325 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 COPS4Q9BT78 406 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 OPN3Q9H1Y3 402 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 NELFAQ9H3P2 528 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 PLSCR4Q9NRQ2 329 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 HAO2Q9NYQ3 351 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 ZNF629Q9UEG4 869 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 PSORS1C1Q9UIG5 152 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 KCNG2Q9UJ96 466 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 PCDHGB1Q9Y5G3 927 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 COMMD3-BMI1R4GMX3 469 aa10.57□□□□□ -0.72
SHKBP1-213ENST00000597325 PTGES3LE9PB15 166 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 H7C1Q1 480 aa10.56□□□□□ -0.72
SHKBP1-213ENST00000597325 MSTNO14793 375 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms