RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 KRT77Q7Z794 578 aa14.85□□□□□ -0.03
LIG1-206ENST00000594067 ZNF679Q8IYX0 411 aa14.85□□□□□ -0.03
LIG1-206ENST00000594067 DEFB119Q8N690 84 aa14.85□□□□□ -0.03
LIG1-206ENST00000594067 ZNF416Q9BWM5 594 aa14.85□□□□□ -0.03
LIG1-206ENST00000594067 EXO5Q9H790 373 aa14.85□□□□□ -0.03
LIG1-206ENST00000594067 PDE7BQ9NP56 450 aa14.85□□□□□ -0.03
LIG1-206ENST00000594067 PRSS37A4D1T9 235 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 H0YIG0 161 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 SLC6A8P48029 635 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 NR0B1P51843 470 aaKnown RBP14.84□□□□□ -0.03
LIG1-206ENST00000594067 LY6G6FQ5SQ64 297 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 PRAMEF17Q5VTA0 474 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 DUSP19Q8WTR2 217 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 NPAS1Q99742 590 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 NUDT9Q9BW91 350 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 ALX4Q9H161 411 aaPredicted RBP14.84□□□□□ -0.03
LIG1-206ENST00000594067 PCDHB16Q9NRJ7 776 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 DHDHQ9UQ10 334 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 TMEM131Q92545 1883 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 EIF4E2O60573 245 aaKnown RBP14.84□□□□□ -0.03
LIG1-206ENST00000594067 DDAH2O95865 285 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 ACHEP22303 614 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 RPL27P61353 136 aaKnown RBP14.84□□□□□ -0.03
LIG1-206ENST00000594067 ADAM8P78325 824 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 STEAP1BQ6NZ63 245 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 ZNF627Q7L945 461 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 MAMDC2Q7Z304 686 aaPredicted RBP14.84□□□□□ -0.03
LIG1-206ENST00000594067 CLEC1AQ8NC01 280 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 OR1J4Q8NGS1 313 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 OR10K1Q8NGX5 313 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 LMX1AQ8TE12 382 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 RNF128Q8TEB7 428 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 ZNF721Q8TF20 911 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 ST8SIA2Q92186 375 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 PTDSS2Q9BVG9 487 aa14.84□□□□□ -0.03
LIG1-206ENST00000594067 MYEF2Q9P2K5 600 aaKnown RBP14.84□□□□□ -0.03
LIG1-206ENST00000594067 MRTO4Q9UKD2 239 aaKnown RBP14.84□□□□□ -0.03
LIG1-206ENST00000594067 HSPB2A8KAH6 182 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 PLATP00750 562 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 IGKV3-11P04433 115 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 CTLA4P16410 223 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 MGMTP16455 207 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 RAB3AP20336 220 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 HSPB2Q16082 182 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 FAM74A1Q5RGS3 127 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 SLC18B1Q6NT16 456 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 FDX2Q6P4F2 183 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 PRSS58Q8IYP2 241 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 DNTTIP1Q9H147 329 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 WDR13Q9H1Z4 485 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 C1orf198Q9H425 327 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 BARX1Q9HBU1 254 aaPredicted RBP14.83□□□□□ -0.03
LIG1-206ENST00000594067 RASL12Q9NYN1 266 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 TAS2R4Q9NYW5 299 aa14.83□□□□□ -0.03
LIG1-206ENST00000594067 DHCR7Q9UBM7 475 aaKnown RBP14.83□□□□□ -0.03
LIG1-206ENST00000594067 CGGBP1Q9UFW8 167 aaPredicted RBP14.83□□□□□ -0.03
LIG1-206ENST00000594067 A0A1W2PPC4 97 aa14.83□□□□□ -0.04
LIG1-206ENST00000594067 FAM74A7A6NL05 159 aa14.83□□□□□ -0.04
LIG1-206ENST00000594067 ITGB2P05107 769 aa14.83□□□□□ -0.04
LIG1-206ENST00000594067 EFNA3P52797 238 aa14.83□□□□□ -0.04
LIG1-206ENST00000594067 FAM74A3Q4VXF1 159 aa14.83□□□□□ -0.04
LIG1-206ENST00000594067 TMEM225Q6GV28 225 aa14.83□□□□□ -0.04
LIG1-206ENST00000594067 TMEM205Q6UW68 189 aa14.83□□□□□ -0.04
LIG1-206ENST00000594067 NUP54Q7Z3B4 507 aa14.83□□□□□ -0.04
LIG1-206ENST00000594067 ZNF546Q86UE3 836 aa14.83□□□□□ -0.04
LIG1-206ENST00000594067 GABRG1Q8N1C3 465 aa14.83□□□□□ -0.04
LIG1-206ENST00000594067 CLRN3Q8NCR9 226 aa14.83□□□□□ -0.04
LIG1-206ENST00000594067 LRRC46Q96FV0 321 aa14.83□□□□□ -0.04
LIG1-206ENST00000594067 C8orf33Q9H7E9 229 aaPredicted RBP14.83□□□□□ -0.04
LIG1-206ENST00000594067 CUTCQ9NTM9 273 aa14.83□□□□□ -0.04
LIG1-206ENST00000594067 ZNF230Q9UIE0 474 aaPredicted RBP14.83□□□□□ -0.04
LIG1-206ENST00000594067 MPZL1O95297 269 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 GP1BBP13224 206 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 FASLGP48023 281 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 EIF2B1Q14232 305 aaKnown RBP14.82□□□□□ -0.04
LIG1-206ENST00000594067 SGCBQ16585 318 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 TEX30Q5JUR7 227 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 FAM166AQ6J272 317 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 C9orf40Q8IXQ3 194 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 LINC00518Q8N0U6 118 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 ZNF519Q8TB69 540 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 GPX8Q8TED1 209 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 ASB5Q8WWX0 329 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 OIT3Q8WWZ8 545 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 ASB17Q8WXJ9 295 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 ASB13Q8WXK3 278 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 C8orf44Q96CB5 159 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 TBL1XR1Q9BZK7 514 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 SLC6A15Q9H2J7 730 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 POFUT1Q9H488 388 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 EPHA6Q9UF33 1036 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 IGLV1-36A0A0B4J1U3 117 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 M0QYG6 137 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 GLULP15104 373 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 SQSTM1Q13501 440 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 GLYATL3Q5SZD4 288 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 HLA-DQA1Q5Y7H0 255 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 KDM8Q8N371 416 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 SLC25A28Q96A46 364 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 ABHD6Q9BV23 337 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms