RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ARL9Q6T311 187 aa19.19■□□□□ 0.66
SSBP4-203ENST00000593641 CALHM3Q86XJ0 350 aa19.19■□□□□ 0.66
SSBP4-203ENST00000593641 GEMIN6Q8WXD5 167 aaKnown RBP19.19■□□□□ 0.66
SSBP4-203ENST00000593641 LRRC58Q96CX6 371 aa19.19■□□□□ 0.66
SSBP4-203ENST00000593641 WNT5BQ9H1J7 359 aa19.19■□□□□ 0.66
SSBP4-203ENST00000593641 NTN4Q9HB63 628 aa19.19■□□□□ 0.66
SSBP4-203ENST00000593641 DDX28Q9NUL7 540 aaKnown RBP19.19■□□□□ 0.66
SSBP4-203ENST00000593641 HTR3EA5X5Y0 456 aa19.18■□□□□ 0.66
SSBP4-203ENST00000593641 TIMM8AO60220 97 aaPredicted RBP19.18■□□□□ 0.66
SSBP4-203ENST00000593641 PIP5K1CO60331 668 aa19.18■□□□□ 0.66
SSBP4-203ENST00000593641 ICMTO60725 284 aa19.18■□□□□ 0.66
SSBP4-203ENST00000593641 EDF1O60869 148 aaKnown RBP19.18■□□□□ 0.66
SSBP4-203ENST00000593641 FOXH1O75593 365 aa19.18■□□□□ 0.66
SSBP4-203ENST00000593641 IFI30P13284 250 aa19.18■□□□□ 0.66
SSBP4-203ENST00000593641 ST3GAL3Q11203 375 aa19.18■□□□□ 0.66
SSBP4-203ENST00000593641 ZER1Q7Z7L7 766 aa19.18■□□□□ 0.66
SSBP4-203ENST00000593641 CLDN22Q8N7P3 220 aa19.18■□□□□ 0.66
SSBP4-203ENST00000593641 BPIFA2Q96DR5 249 aa19.18■□□□□ 0.66
SSBP4-203ENST00000593641 MSL2Q9HCI7 577 aa19.18■□□□□ 0.66
SSBP4-203ENST00000593641 NDRG4Q9ULP0 352 aaKnown RBP19.18■□□□□ 0.66
SSBP4-203ENST00000593641 A0A1W2PPL8 197 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 HMGB1P1B2RPK0 211 aaPredicted RBP19.17■□□□□ 0.66
SSBP4-203ENST00000593641 NGFP01138 241 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 IGHMP01871 453 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 CD55P08174 381 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 EGR1P18146 543 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 CTXN1P60606 82 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 TNFAIP6P98066 277 aaPredicted RBP19.17■□□□□ 0.66
SSBP4-203ENST00000593641 CYBRD1Q53TN4 286 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 MTX3Q5HYI7 312 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 ZNF774Q6NX45 483 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 RBMS3Q6XE24 437 aaKnown RBP19.17■□□□□ 0.66
SSBP4-203ENST00000593641 ZDHHC22Q8N966 263 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 C22orf15Q8WYQ4 148 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 TPD52L3Q96J77 140 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 C4orf45Q96LM5 186 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 PRRC1Q96M27 445 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 ESM1Q9NQ30 184 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 MRGBPQ9NV56 204 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 OPN4Q9UHM6 478 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 NPTNQ9Y639 398 aa19.17■□□□□ 0.66
SSBP4-203ENST00000593641 PPIAL4EA0A075B759 164 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 PPIAL4CA0A0B4J2A2 164 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 A6NIZ1 184 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 C12orf71A8MTZ7 269 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 PPIAL4DF5H284 164 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 FXYD1O00168 92 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 ABHD16AO95870 558 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 NPPAP01160 153 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 FSHBP01225 129 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 PPIAL4FP0DN26 164 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 GSTM3P21266 225 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 MSR1P21757 451 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 TNFSF4P23510 183 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 RAP1BP61224 184 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 RAP1AP62834 184 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 AWAT1Q58HT5 328 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 COQ5Q5HYK3 327 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 FOXL2NBQ6ZUU3 175 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 IGFN1Q86VF2 1251 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 SPICQ8N5J4 248 aa19.16■□□□□ 0.66
SSBP4-203ENST00000593641 DOCK11Q5JSL3 2073 aa19.15■□□□□ 0.66
SSBP4-203ENST00000593641 BBIP1A8MTZ0 92 aa19.15■□□□□ 0.66
SSBP4-203ENST00000593641 MRASO14807 208 aa19.15■□□□□ 0.66
SSBP4-203ENST00000593641 UBA52P62987 128 aaKnown RBP19.15■□□□□ 0.66
SSBP4-203ENST00000593641 ARMCX4Q5H9R4 360 aa19.15■□□□□ 0.66
SSBP4-203ENST00000593641 SYT9Q86SS6 491 aa19.15■□□□□ 0.66
SSBP4-203ENST00000593641 KLHL36Q8N4N3 616 aa19.15■□□□□ 0.66
SSBP4-203ENST00000593641 NPEPL1Q8NDH3 523 aa19.15■□□□□ 0.66
SSBP4-203ENST00000593641 C10orf82Q8WW14 230 aa19.15■□□□□ 0.66
SSBP4-203ENST00000593641 POP5Q969H6 163 aaKnown RBP19.15■□□□□ 0.66
SSBP4-203ENST00000593641 ZNF583Q96ND8 569 aa19.15■□□□□ 0.66
SSBP4-203ENST00000593641 DCLRE1CQ96SD1 692 aaKnown RBP19.15■□□□□ 0.66
SSBP4-203ENST00000593641 KLHL21Q9UJP4 597 aa19.15■□□□□ 0.66
SSBP4-203ENST00000593641 PPIAL4AQ9Y536 164 aa19.15■□□□□ 0.66
SSBP4-203ENST00000593641 TRAV27A0A087WT01 109 aa19.14■□□□□ 0.65
SSBP4-203ENST00000593641 IGHV2-70P01814 119 aa19.14■□□□□ 0.65
SSBP4-203ENST00000593641 SBK2P0C263 348 aa19.14■□□□□ 0.65
SSBP4-203ENST00000593641 TNFRSF1AP19438 455 aa19.14■□□□□ 0.65
SSBP4-203ENST00000593641 PSG7Q13046 419 aa19.14■□□□□ 0.65
SSBP4-203ENST00000593641 ENDOGQ14249 297 aaKnown RBP19.14■□□□□ 0.65
SSBP4-203ENST00000593641 MICU2Q8IYU8 434 aa19.14■□□□□ 0.65
SSBP4-203ENST00000593641 OR51A7Q8NH64 312 aa19.14■□□□□ 0.65
SSBP4-203ENST00000593641 TMEM120AQ9BXJ8 343 aa19.14■□□□□ 0.65
SSBP4-203ENST00000593641 TMEM106BQ9NUM4 274 aa19.14■□□□□ 0.65
SSBP4-203ENST00000593641 PURGQ9UJV8 347 aaKnown RBP19.14■□□□□ 0.65
SSBP4-203ENST00000593641 A4GNTQ9UNA3 340 aa19.14■□□□□ 0.65
SSBP4-203ENST00000593641 FAM220BPB1ANY3 271 aa19.13■□□□□ 0.65
SSBP4-203ENST00000593641 WIPF1O43516 503 aa19.13■□□□□ 0.65
SSBP4-203ENST00000593641 ZFP36P26651 326 aaKnown RBP19.13■□□□□ 0.65
SSBP4-203ENST00000593641 KDELR2P33947 212 aa19.13■□□□□ 0.65
SSBP4-203ENST00000593641 SCRN3Q0VDG4 424 aa19.13■□□□□ 0.65
SSBP4-203ENST00000593641 CDK5R2Q13319 367 aa19.13■□□□□ 0.65
SSBP4-203ENST00000593641 MAPRE2Q15555 327 aa19.13■□□□□ 0.65
SSBP4-203ENST00000593641 ANKDD1AQ495B1 522 aa19.13■□□□□ 0.65
SSBP4-203ENST00000593641 SPRNQ5BIV9 151 aa19.13■□□□□ 0.65
SSBP4-203ENST00000593641 OAFQ86UD1 273 aa19.13■□□□□ 0.65
SSBP4-203ENST00000593641 NRMQ8IXM6 262 aa19.13■□□□□ 0.65
SSBP4-203ENST00000593641 LRRC75AQ8NAA5 344 aa19.13■□□□□ 0.65
SSBP4-203ENST00000593641 PCYOX1LQ8NBM8 494 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms