RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 HCSTQ9UBK5 93 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 SHPKQ9UHJ6 478 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 MSRAQ9UJ68 235 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 OR52A1Q9UKL2 312 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 CES1P1Q9UKY3 287 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 SLC5A6Q9Y289 635 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 EYSQ5T1H1 3165 aa3.21□□□□□ -1.89
VMP1-216ENST00000592790 LAMA3Q16787 3333 aa3.21□□□□□ -1.89
VMP1-216ENST00000592790 NLRC5Q86WI3 1866 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 ZC3H12DA2A288 527 aaKnown RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 CPED1A4D0V7 1026 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 A8MXK9 166 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 C17orf105B2RV13 164 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 PRRT4C9JH25 899 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 TSTD3H0UI37 97 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 PRAMEF26H0Y7S4 382 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 PEX12O00623 359 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 TO15178 435 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 GREM1O60565 184 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 PTP4A3O75365 173 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 DUS4LO95620 317 aaKnown RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 F10P00742 488 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 IFNA2P01563 188 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 CD3DP04234 171 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 DPP4P27487 766 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 CSF2RBP32927 897 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 CD79BP40259 229 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 MAGEB1P43366 347 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 CD81P60033 236 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 UBE2IP63279 158 aaKnown RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 BTG2P78543 158 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 ZNF616Q08AN1 781 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 MEP1BQ16820 701 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.21□□□□□ -1.9
VMP1-216ENST00000592790 TRMT12Q53H54 448 aaKnown RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 TMEM128Q5BJH2 165 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 KRBOX4Q5JUW0 171 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 LILRA6Q6PI73 481 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 C16orf54Q6UWD8 224 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 TMEM184AQ6ZMB5 413 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 CD163Q86VB7 1156 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 ZNF547Q8IVP9 402 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 UEVLDQ8IX04 471 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 MUC20Q8N307 709 aaPredicted RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 SUMF2Q8NBJ7 301 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 OR11G2Q8NGC1 345 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 OR5M1Q8NGP8 315 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 OTOSQ8NHW6 89 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 BAHD1Q8TBE0 780 aaPredicted RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 HMGB4Q8WW32 186 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 RASD2Q96D21 266 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 PGAM5Q96HS1 289 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 PGLYRP3Q96LB9 341 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 C4orf45Q96LM5 186 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 C2orf50Q96LR7 162 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 Q96M85 177 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 ZNF681Q96N22 645 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 CLCC1Q96S66 551 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 GPX7Q96SL4 187 aaPredicted RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 ELF4Q99607 663 aaPredicted RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 GDF15Q99988 308 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 NAA11Q9BSU3 229 aaPredicted RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 TMEM59Q9BXS4 323 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 ENKD1Q9H0I2 346 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 ZCCHC4Q9H5U6 513 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 TAF9BQ9HBM6 251 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 HCFC1R1Q9NWW0 138 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 CHRNA9Q9UGM1 479 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 ZNF223Q9UK11 482 aaPredicted RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 DTX4Q9Y2E6 619 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 HS3ST3A1Q9Y663 406 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 R4GMQ9 66 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 A0A1W2PS29 197 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 OR6C76A6NM76 312 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 FIGNL2A6NMB9 653 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 A8MUA0 341 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 TMEM229AB2RXF0 380 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 TP53I11O14683 189 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 SMAD7O15105 426 aaKnown RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 LANCL1O43813 399 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 SSX5O60225 188 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 ZFPL1O95159 310 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 HPXP02790 462 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 HOXD4P09016 255 aaPredicted RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 OR8U9P0C7N5 309 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 CCL5P13501 91 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 FBLP22087 321 aaKnown RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 RPS4Y1P22090 263 aaKnown RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 CPT2P23786 658 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 PTAFRP25105 342 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 PPICP45877 212 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 CLDN6P56747 220 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 NKX6-1P78426 367 aaPredicted RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 OC90Q02509 493 aaPredicted RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 HHEXQ03014 270 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 TLE3Q04726 772 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 GPM6BQ13491 265 aa3.21□□□□□ -1.9
VMP1-216ENST00000592790 CNN3Q15417 329 aaKnown RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 SURF2Q15527 256 aaPredicted RBP3.21□□□□□ -1.9
VMP1-216ENST00000592790 ZXDCQ2QGD7 858 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms