RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 DAG1Q14118 895 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 RAB35Q15286 201 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 FAM27BQ5VT28 67 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 KRT80Q6KB66 452 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 TMEM53Q6P2H8 277 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 SLC30A7Q8NEW0 376 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 RASD2Q96D21 266 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 CLPTM1LQ96KA5 538 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 ZNF570Q96NI8 536 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 SORCS2Q96PQ0 1159 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 RBP7Q96R05 134 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 DOK1Q99704 481 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 MAGIXQ9H6Y5 334 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 KRCC1Q9NPI7 259 aaPredicted RBP9.65□□□□□ -0.86
SMAD4-211ENST00000590499 GRHPRQ9UBQ7 328 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 LYVE1Q9Y5Y7 322 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 PMF1-BGLAPU3KQ54 211 aa9.65□□□□□ -0.86
SMAD4-211ENST00000590499 IGHV4-30-2A0A087WSY4 118 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 TEX13CA0A0J9YWL9 993 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 ACOT8O14734 319 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 SMAD7O15105 426 aaKnown RBP9.64□□□□□ -0.87
SMAD4-211ENST00000590499 UBOX5O94941 541 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 SNAP29O95721 258 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 LY6G6DO95868 133 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 SCG5P05408 212 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 HEXAP06865 529 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 APEHP13798 732 aaKnown RBP9.64□□□□□ -0.87
SMAD4-211ENST00000590499 CTLA4P16410 223 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 ZNF32P17041 273 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 SDHAP31040 664 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 GSSP48637 474 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 PPOXP50336 477 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 NUDT6P53370 316 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 ENDOGQ14249 297 aaKnown RBP9.64□□□□□ -0.87
SMAD4-211ENST00000590499 GPR139Q6DWJ6 353 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 ZNF770Q6IQ21 691 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-211ENST00000590499 C1orf94Q6P1W5 598 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 PGBD2Q6P3X8 592 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 SMARCD3Q6STE5 483 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 DPY19L2P2Q6ZN68 376 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 DHFR2Q86XF0 187 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 SVOPLQ8N434 492 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 LRRC18Q8N456 261 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 ZNF525Q8N782 197 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 CPEB3Q8NE35 698 aaKnown RBP9.64□□□□□ -0.87
SMAD4-211ENST00000590499 OR4C15Q8NGM1 316 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 FANK1Q8TC84 345 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 MRPL24Q96A35 216 aaKnown RBP9.64□□□□□ -0.87
SMAD4-211ENST00000590499 ASB9Q96DX5 294 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 REG4Q9BYZ8 158 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 NDEL1Q9GZM8 345 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 C1orf198Q9H425 327 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 POLE4Q9NR33 117 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 VSX1Q9NZR4 365 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-211ENST00000590499 IL20RAQ9UHF4 553 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 SLC7A8Q9UHI5 535 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 AURKCQ9UQB9 309 aa9.64□□□□□ -0.87
SMAD4-211ENST00000590499 JMJD1CQ15652 2540 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 FAM171A2A8MVW0 826 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 XKRYO14609 159 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 IMPA2O14732 288 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 OR10H3O60404 316 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 KRT36O76013 467 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 LY6HO94772 140 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 CST2P09228 141 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 CCL2P13500 99 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 MSR1P21757 451 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 LAP3P28838 519 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 EVX1P49640 407 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 DSCR9P59020 149 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 PSG4Q00888 419 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 SGCAQ16586 387 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 RFX4Q33E94 735 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 PABPC1L2AQ5JQF8 200 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 PGM2L1Q6PCE3 622 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 CLEC9AQ6UXN8 241 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 PTCHD4Q6ZW05 846 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 ADCK1Q86TW2 530 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 CCDC124Q96CT7 223 aaKnown RBP9.63□□□□□ -0.87
SMAD4-211ENST00000590499 SLC7A6OSQ96CW6 309 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-211ENST00000590499 BTBD10Q9BSF8 475 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 ZNF416Q9BWM5 594 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 MRPL37Q9BZE1 423 aaKnown RBP9.63□□□□□ -0.87
SMAD4-211ENST00000590499 TRIM15Q9C019 465 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 WNT5BQ9H1J7 359 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 OR52D1Q9H346 318 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 RNF121Q9H920 327 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 VNN3Q9NY84 501 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 FBXO9Q9UK97 447 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-211ENST00000590499 CMAHPQ9Y471 501 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 SPEF1Q9Y4P9 236 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 IER3IP1Q9Y5U9 82 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.63□□□□□ -0.872e-7■■□□□ 13.6
SMAD4-211ENST00000590499 ABCA2Q9BZC7 2435 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 SVEP1Q4LDE5 3571 aa9.63□□□□□ -0.87
SMAD4-211ENST00000590499 LOC100509620A0A075B734 347 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 A0A1W2PPL8 197 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 VSTM5A8MXK1 200 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 SOCS2O14508 198 aa9.62□□□□□ -0.87
SMAD4-211ENST00000590499 ARPC3O15145 178 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms