RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 POLR3GO15318 223 aaPredicted RBP12.81□□□□□ -0.36
ACTN4-211ENST00000589528 ABHD16AO95870 558 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 NGFP01138 241 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 UGT2B15P54855 530 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 WDR4P57081 412 aaKnown RBP12.81□□□□□ -0.36
ACTN4-211ENST00000589528 PCBD1P61457 104 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 ZMYND11Q15326 602 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 NPTX1Q15818 432 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 OCLNQ16625 522 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 DUSP7Q16829 419 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 PAGE3Q5JUK9 113 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 ZNF362Q5T0B9 420 aaPredicted RBP12.81□□□□□ -0.36
ACTN4-211ENST00000589528 OR4F5Q8NH21 305 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 UBE2FQ969M7 185 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 THOC1Q96FV9 657 aaKnown RBP12.81□□□□□ -0.36
ACTN4-211ENST00000589528 C4orf45Q96LM5 186 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 SSBP3Q9BWW4 388 aaPredicted RBP12.81□□□□□ -0.36
ACTN4-211ENST00000589528 OR2H1Q9GZK4 316 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 SMURF2Q9HAU4 748 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 TNFRSF19Q9NS68 423 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 NKIRAS1Q9NYS0 192 aa12.81□□□□□ -0.36
ACTN4-211ENST00000589528 NOTCH1P46531 2555 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 F5H0A9 414 aaPredicted RBP12.8□□□□□ -0.36
ACTN4-211ENST00000589528 M0QX08 132 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 TIMM23O14925 209 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 HOXA3O43365 443 aaPredicted RBP12.8□□□□□ -0.36
ACTN4-211ENST00000589528 RPS2P15880 293 aaKnown RBP12.8□□□□□ -0.36
ACTN4-211ENST00000589528 CD80P33681 288 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 RBMXP38159 391 aaKnown RBP12.8□□□□□ -0.36
ACTN4-211ENST00000589528 AQP2P41181 271 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 GNB2P62879 340 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 PAX8Q06710 450 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 FMODQ06828 376 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 SRSF4Q08170 494 aaKnown RBP12.8□□□□□ -0.36
ACTN4-211ENST00000589528 CDK5R2Q13319 367 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 WDR93Q6P2C0 686 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 BLOC1S3Q6QNY0 202 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 C9orf139Q6ZV77 190 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 CROCCP2Q86T23 111 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 RBM45Q8IUH3 476 aaKnown RBP12.8□□□□□ -0.36
ACTN4-211ENST00000589528 KIR3DL3Q8N743 410 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 ITLN1Q8WWA0 313 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 WFDC12Q8WWY7 111 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 NABP1Q96AH0 204 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 SEPHS2Q99611 448 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 WNT5BQ9H1J7 359 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 MMP27Q9H306 513 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 IKZF5Q9H5V7 419 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 MAN2C1Q9NTJ4 1040 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 PDP1Q9P0J1 537 aaPredicted RBP12.8□□□□□ -0.36
ACTN4-211ENST00000589528 KLHL21Q9UJP4 597 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 TIMM10BQ9Y5J6 103 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 USH1CQ9Y6N9 552 aa12.8□□□□□ -0.36
ACTN4-211ENST00000589528 MDFIC2A0A1B0GVS7 189 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 FAM181BA6NEQ2 426 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 CEACAM18A8MTB9 384 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 OR7A10O76100 309 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 MT-ND1P03886 318 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 THY1P04216 161 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 PPIAL4GP0DN37 164 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 FUT1P19526 365 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 ZNF133P52736 654 aaPredicted RBP12.79□□□□□ -0.36
ACTN4-211ENST00000589528 RAG2P55895 527 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 PCBP3P57721 371 aaKnown RBP12.79□□□□□ -0.36
ACTN4-211ENST00000589528 PSG7Q13046 419 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 TOP3AQ13472 1001 aaPredicted RBP12.79□□□□□ -0.36
ACTN4-211ENST00000589528 FAM27BQ5VT28 67 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 ZNF774Q6NX45 483 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 NPEPL1Q8NDH3 523 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 GPR32P1Q8NGA4 272 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 SGTBQ96EQ0 304 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 PLEKHA8Q96JA3 519 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 RBP7Q96R05 134 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 PKP2Q99959 881 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 MEPEQ9NQ76 525 aaPredicted RBP12.79□□□□□ -0.36
ACTN4-211ENST00000589528 IL19Q9UHD0 177 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 NDRG4Q9ULP0 352 aaKnown RBP12.79□□□□□ -0.36
ACTN4-211ENST00000589528 UGT2A1Q9Y4X1 527 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 GMEB1Q9Y692 573 aa12.79□□□□□ -0.36
ACTN4-211ENST00000589528 IGHV2-70DA0A0C4DH43 119 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 A0A1W2PPL8 197 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 LYPD3O95274 346 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 PLATP00750 562 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 CST2P09228 141 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 LAP3P28838 519 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 MRPL19P49406 292 aaKnown RBP12.78□□□□□ -0.36
ACTN4-211ENST00000589528 TNFAIP8L3Q5GJ75 292 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 OLFML2AQ68BL7 652 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 FIP1L1Q6UN15 594 aaKnown RBP12.78□□□□□ -0.36
ACTN4-211ENST00000589528 EPGNQ6UW88 154 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 FUNDC1Q8IVP5 155 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 SLC30A8Q8IWU4 369 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 PFN4Q8NHR9 129 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 HDAC2Q92769 488 aaKnown RBP12.78□□□□□ -0.36
ACTN4-211ENST00000589528 UPRTQ96BW1 309 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 OR2V2Q96R30 315 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 CPPED1Q9BRF8 314 aaPredicted RBP12.78□□□□□ -0.36
ACTN4-211ENST00000589528 SLC30A2Q9BRI3 323 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 ZNF426Q9BUY5 554 aa12.78□□□□□ -0.36
ACTN4-211ENST00000589528 MIOXQ9UGB7 285 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms