RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 TMEM54Q969K7 222 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 SPTSSAQ969W0 71 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 SLAMF6Q96DU3 332 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 ABHD17AQ96GS6 310 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 ZNF845Q96IR2 970 aaPredicted RBP5.49□□□□□ -1.53
LIG3-206ENST00000586058 CEP19Q96LK0 163 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 ZFP3Q96NJ6 502 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 FOXN4Q96NZ1 517 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 ZNF385AQ96PM9 386 aaKnown RBP5.49□□□□□ -1.53
LIG3-206ENST00000586058 OR8B4Q96RC9 309 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 TIMP4Q99727 224 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 TM9SF2Q99805 663 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 FOXB1Q99853 325 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 WACQ9BTA9 647 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 HDHD5Q9BXW7 423 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 MRPL13Q9BYD1 178 aaKnown RBP5.49□□□□□ -1.53
LIG3-206ENST00000586058 LINC00470Q9BZP3 86 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 PRDM14Q9GZV8 571 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 DCSTAMPQ9H295 470 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 CALHM2Q9HA72 323 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 BCO1Q9HAY6 547 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 PLEKHA1Q9HB21 404 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 CENPMQ9NSP4 180 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 ACOXLQ9NUZ1 547 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 GALNT8Q9NY28 637 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 CCDC59Q9P031 241 aaKnown RBP5.49□□□□□ -1.53
LIG3-206ENST00000586058 CRNNQ9UBG3 495 aaPredicted RBP5.49□□□□□ -1.53
LIG3-206ENST00000586058 CKLFQ9UBR5 152 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 WASF3Q9UPY6 502 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 RAXQ9Y2V3 346 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 CSAG2Q9Y5P2 127 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 ZNF407Q9C0G0 2248 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 DMDP11532 3685 aa5.49□□□□□ -1.53
LIG3-206ENST00000586058 CNOT1A5YKK6 2376 aaKnown RBP5.49□□□□□ -1.53
LIG3-206ENST00000586058 A0A1B0GTH9 108 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 A0A1B0GVC2 190 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 TRDV1A0A1B0GX56 115 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 A0A1W2PPW3 197 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 AHRRA9YTQ3 701 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 ZNF814B7Z6K7 855 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 H0YC42 278 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 GABRPO00591 440 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 PRRG2O14669 202 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 PDCD5O14737 125 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 PLPP2O43688 288 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 RAMP1O60894 148 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 GATBO75879 557 aaKnown RBP5.48□□□□□ -1.53
LIG3-206ENST00000586058 F12P00748 615 aaPredicted RBP5.48□□□□□ -1.53
LIG3-206ENST00000586058 CD1AP06126 327 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 HOXD4P09016 255 aaPredicted RBP5.48□□□□□ -1.53
LIG3-206ENST00000586058 GAAP10253 952 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 ZNF12P17014 697 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 ALOX5APP20292 161 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 FGF9P31371 208 aaPredicted RBP5.48□□□□□ -1.53
LIG3-206ENST00000586058 PTGS2P35354 604 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 UGT2B10P36537 528 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 PEX19P40855 299 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 SLC6A9P48067 706 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 RORCP51449 518 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 NCS1P62166 190 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 RPS25P62851 125 aaKnown RBP5.48□□□□□ -1.53
LIG3-206ENST00000586058 ROR2Q01974 943 aaKnown RBP5.48□□□□□ -1.53
LIG3-206ENST00000586058 TGFBR3Q03167 851 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 ALKBH1Q13686 389 aaKnown RBP5.48□□□□□ -1.53
LIG3-206ENST00000586058 SSX1Q16384 188 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 KCNMB1Q16558 191 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 C3AR1Q16581 482 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 HIST3H3Q16695 136 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 MEP1BQ16820 701 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 CEACAM16Q2WEN9 425 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 NRN1LQ496H8 165 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 C22orf42Q6IC83 251 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 TMEM53Q6P2H8 277 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 ZNF585AQ6P3V2 769 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 SLC25A47Q6Q0C1 308 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 LYPD4Q6UWN0 246 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 LRRN1Q6UXK5 716 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 ZNF813Q6ZN06 617 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 ZNF704Q6ZNC4 412 aaPredicted RBP5.48□□□□□ -1.53
LIG3-206ENST00000586058 SLC16A12Q6ZSM3 486 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 SPATC1Q76KD6 591 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 RHOUQ7L0Q8 258 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 SLC16A14Q7RTX9 510 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 FGD2Q7Z6J4 655 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 DPPA2Q7Z7J5 298 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 LSRQ86X29 649 aaPredicted RBP5.48□□□□□ -1.53
LIG3-206ENST00000586058 LINC00346Q8IVM7 164 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 TUSC5Q8IXB3 177 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 TMEM123Q8N131 208 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 ZNF283Q8N7M2 679 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 ZFP41Q8N8Y5 198 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 S100ZQ8WXG8 99 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 C11orf40Q8WZ69 217 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 PHYHIPQ92561 330 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 TMEM203Q969S6 136 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 PELI1Q96FA3 418 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 WDYHV1Q96HA8 205 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 GPR137Q96N19 417 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 DACH2Q96NX9 599 aa5.48□□□□□ -1.53
LIG3-206ENST00000586058 DDOQ99489 341 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms