RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 ETFDHQ16134 617 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TUSC1Q2TAM9 212 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 C11orf88Q6PI97 169 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CATSPERDQ86XM0 798 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 NKX3-1Q99801 234 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 POTEKPQ9BYX7 375 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 POFUT1Q9H488 388 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 PRMT8Q9NR22 394 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 UPB1Q9UBR1 384 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TLCD2A6NGC4 264 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 DXOO77932 396 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 AQP8O94778 261 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 PMS2P2O95744 297 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CD2P06729 351 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 NAGAP17050 411 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 FSTP19883 344 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 RIDAP52758 137 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 DCAF7P61962 342 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ADAM8P78325 824 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 EBPQ15125 230 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 GLYATL3Q5SZD4 288 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 OVCH2Q7RTZ1 564 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CDH26Q8IXH8 852 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TMEM229BQ8NBD8 167 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CCDC107Q8WV48 283 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ABHD6Q9BV23 337 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 NUDT9Q9BW91 350 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CHRNA10Q9GZZ6 450 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TTYH1Q9H313 450 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 SCPEP1Q9HB40 452 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 PFDN2Q9UHV9 154 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 KRBOX1C9JBD0 128 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TSPAN2O60636 221 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 OR4E1P0C645 316 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 GP1BBP13224 206 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 OR1D4P47884 311 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 UBXN2BQ14CS0 331 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ZNF660Q6AZW8 331 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TTLL10Q6ZVT0 673 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 OR6K3Q8NGY3 331 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 DUSP19Q8WTR2 217 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 SLC41A2Q96JW4 573 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 SLC25A21Q9BQT8 299 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CUTCQ9NTM9 273 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TAS2R4Q9NYW5 299 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 LRP12Q9Y561 859 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 MRPS18BQ9Y676 258 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TMEM82A0PJX8 343 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 SLC22A23A1A5C7 686 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 RFPL4AA6NLU0 287 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 RFPL4AL1F8VTS6 287 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 RAB3DO95716 219 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 IL32P24001 234 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 PPM1FP49593 454 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 SORDQ00796 357 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 EIF2B1Q14232 305 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ELOCQ15369 112 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ELAVL1Q15717 326 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TMEM205Q6UW68 189 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 C9orf40Q8IXQ3 194 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 OR6M1Q8NGM8 313 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 OR5M9Q8NGP3 310 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 DPYSL5Q9BPU6 564 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TBL1XR1Q9BZK7 514 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 MFFQ9GZY8 342 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 SHARPINQ9H0F6 387 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 SLCO5A1Q9H2Y9 848 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 C12orf4Q9NQ89 552 aa12.76□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CPAMD8Q8IZJ3 1885 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TMED7-TICAM2A0A0A6YYA0 188 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TO15178 435 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 DOK2O60496 412 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 IGHMP01871 453 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 FGF2P09038 288 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 MPGP29372 298 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 NR0B1P51843 470 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 POLR2HP52434 150 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ZP2Q05996 745 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 LY6G6FQ5SQ64 297 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TMEM81Q6P7N7 255 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ZNF627Q7L945 461 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 MDGA2Q7Z553 956 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ZNF454Q8N9F8 522 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 SLC25A44Q96H78 314 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ZNF587Q96SQ5 575 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 MYOZ1Q9NP98 299 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TMED7Q9Y3B3 224 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 GON4LQ3T8J9 2241 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 SHISA7A6NL88 538 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 A8MVM7 634 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 H3BMH7 237 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 LDLRAD4O15165 306 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 SRSF10O75494 262 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 GLO1Q04760 184 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 C1orf140Q5VVS0 124 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 GALNT16Q8N428 558 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 C12orf45Q8N5I9 185 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms