RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	SRD5A1	P18405	259 aa		11.65	□□□□□ -0.54
CDK5RAP3-233	ENST00000584186	HNF1A	P20823	631 aa		11.65	□□□□□ -0.54
CDK5RAP3-233	ENST00000584186	ACHE	P22303	614 aa		11.65	□□□□□ -0.54
CDK5RAP3-233	ENST00000584186	GCH1	P30793	250 aa		11.65	□□□□□ -0.54
CDK5RAP3-233	ENST00000584186	WNT5A	P41221	380 aa		11.65	□□□□□ -0.54
CDK5RAP3-233	ENST00000584186	UGT2A3	Q6UWM9	527 aa		11.65	□□□□□ -0.54
CDK5RAP3-233	ENST00000584186	ABHD4	Q8TB40	342 aa		11.65	□□□□□ -0.54
CDK5RAP3-233	ENST00000584186	GTF3A	Q92664	365 aa	Known RBP	11.65	□□□□□ -0.54
CDK5RAP3-233	ENST00000584186	HPS1	Q92902	700 aa		11.65	□□□□□ -0.54
CDK5RAP3-233	ENST00000584186	RASD2	Q96D21	266 aa		11.65	□□□□□ -0.54
CDK5RAP3-233	ENST00000584186	ZNF416	Q9BWM5	594 aa		11.65	□□□□□ -0.54
CDK5RAP3-233	ENST00000584186	POLE4	Q9NR33	117 aa		11.65	□□□□□ -0.54
CDK5RAP3-233	ENST00000584186	ZNF275	Q9NSD4	429 aa	Predicted RBP	11.65	□□□□□ -0.54
CDK5RAP3-233	ENST00000584186	AURKC	Q9UQB9	309 aa		11.65	□□□□□ -0.54
CDK5RAP3-233	ENST00000584186	PRSS37	A4D1T9	235 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	UNC119B	A6NIH7	251 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	SOCS2	O14508	198 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	NDUFB2	O95178	105 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	SCG5	P05408	212 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	ITGA2	P17301	1181 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	MPV17	P39210	176 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	MXRA7	P84157	204 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	KRR1	Q13601	381 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	ENDOG	Q14249	297 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	SEC23B	Q15437	767 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	MOG	Q16653	247 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	TST	Q16762	297 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	PCGF3	Q3KNV8	242 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	ZNF718	Q3SXZ3	478 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	OTP	Q5XKR4	325 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	UNQ6126/PRO20091	Q6UXV3	157 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	FOXL2NB	Q6ZUU3	175 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	FAM122B	Q7Z309	247 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	LINC01356	Q8N9X3	169 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	SLC25A40	Q8TBP6	338 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	PYURF	Q96I23	114 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	RSRC1	Q96IZ7	334 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	C7orf34	Q96L11	122 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	LRRC37B	Q96QE4	947 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	CDRT15	Q96T59	188 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	OR2J1	Q9GZK6	312 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	KRCC1	Q9NPI7	259 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	DECR2	Q9NUI1	292 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	ARL8B	Q9NVJ2	186 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	MAGEL2	Q9UJ55	1249 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	ARL2BP	Q9Y2Y0	163 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	IER3IP1	Q9Y5U9	82 aa		11.64	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	COL6A5	A8TX70	2615 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	MALRD1	Q5VYJ5	2156 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	PLSCR5	A0PG75	271 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	PHF1	O43189	567 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	SPRY3	O43610	288 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	SLC16A7	O60669	478 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	PTP4A3	O75365	173 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	NGF	P01138	241 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	IGHV3-13	P01766	116 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	CTLA4	P16410	223 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	OMP	P47874	163 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	LIMS1	P48059	325 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	CENPA	P49450	140 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	ZNF81	P51508	661 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	TMEM33	P57088	247 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	PPP1CB	P62140	327 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	SPIB	Q01892	262 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	CR1L	Q2VPA4	569 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	SAMD4B	Q5PRF9	694 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	THSD4	Q6ZMP0	1018 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	RFPL4B	Q6ZWI9	263 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	PGAM4	Q8N0Y7	254 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	CLDND2	Q8NHS1	167 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	MCUR1	Q96AQ8	359 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	MARS2	Q96GW9	593 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	C4orf45	Q96LM5	186 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	NSMCE2	Q96MF7	247 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	SYT4	Q9H2B2	425 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	GORASP2	Q9H8Y8	452 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	LPAR2	Q9HBW0	351 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	TREM2	Q9NZC2	230 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	TAGLN3	Q9UI15	199 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	SIGLEC7	Q9Y286	467 aa		11.63	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	IMPA2	O14732	288 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	WNT9B	O14905	357 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	AHCYL1	O43865	530 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	DOK2	O60496	412 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	KHDRBS3	O75525	346 aa	Known RBP	11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	GADD45G	O95257	159 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	MPZL1	O95297	269 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	ABHD16A	O95870	558 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	HSD17B1	P14061	328 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	SDHA	P31040	664 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	HTR5A	P47898	357 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	ARHGDIA	P52565	204 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	CDH15	P55291	814 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	SMIM11A	P58511	58 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	MRPS11	P82912	194 aa	Known RBP	11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	MVK	Q03426	396 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	SCRN3	Q0VDG4	424 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	AVPI1	Q5T686	147 aa		11.62	□□□□□ -0.55
CDK5RAP3-233	ENST00000584186	GPR139	Q6DWJ6	353 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms