RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 CBX1P83916 185 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 GK3PQ14409 553 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 OTPQ5XKR4 325 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 ALDH16A1Q8IZ83 802 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 ICA1LQ8NDH6 482 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 CPEB3Q8NE35 698 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 SDR9C7Q8NEX9 313 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 OR52E2Q8NGJ4 325 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 GIPC3Q8TF64 312 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 C18orf12Q96KH6 178 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 TSSK6Q9BXA6 273 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 DGCR6LQ9BY27 220 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 PLA2G12AQ9BZM1 189 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 OR2H1Q9GZK4 316 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 SRA1Q9HD15 236 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 DYNLRB1Q9NP97 96 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 RPRD1BQ9NQG5 326 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 DLL4Q9NR61 685 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 IL20Q9NYY1 176 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 FZR1Q9UM11 496 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 POLR1DQ9Y2S0 133 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 TIMM10BQ9Y5J6 103 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 FLNAP21333 2647 aaKnown RBP10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 C5orf49A4QMS7 147 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 MPZL1O95297 269 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 SNAP29O95721 258 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 GPANK1O95872 356 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 LCKP06239 509 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 IGFBP1P08833 259 aaPredicted RBP10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 INHBBP09529 407 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 FOSL1P15407 271 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 SCRN3Q0VDG4 424 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 TNK1Q13470 666 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 C1orf146Q5VVC0 180 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 ZNF774Q6NX45 483 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 CLEC2AQ6UVW9 174 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 SYT9Q86SS6 491 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 CIARTQ8N365 385 aaPredicted RBP10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 OR8D4Q8NGM9 314 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 MRPL24Q96A35 216 aaKnown RBP10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 SORCS2Q96PQ0 1159 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 SNX18Q96RF0 628 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 FEVQ99581 238 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 NIPSNAP1Q9BPW8 284 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 SYT3Q9BQG1 590 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 MRPL37Q9BZE1 423 aaKnown RBP10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 WNT5BQ9H1J7 359 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 MMADHCQ9H3L0 296 aaPredicted RBP10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 FN3KQ9H479 309 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 ARMC1Q9NVT9 282 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 PDP1Q9P0J1 537 aaPredicted RBP10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 FBXO9Q9UK97 447 aaPredicted RBP10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 FKBP7Q9Y680 259 aa10.86□□□□□ -0.67
SMARCE1-218ENST00000582955 IGLV1-36A0A0B4J1U3 117 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 TMEM129A0AVI4 362 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 DCTN6O00399 190 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 BHLHE40O14503 412 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 DOK2O60496 412 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 CIB2O75838 187 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 LY6HO94772 140 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 RAD52P43351 418 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 PPOXP50336 477 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 EFNA4P52798 201 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 UCP2P55851 309 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 DBPQ10586 325 aaPredicted RBP10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 AQP6Q13520 282 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 MSMPQ1L6U9 139 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 RGS7BPQ6MZT1 257 aaPredicted RBP10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 CCDC121Q6ZUS5 278 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 TMEM179BQ7Z7N9 219 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 OR6V1Q8N148 313 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 ZNF525Q8N782 197 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 PAPD5Q8NDF8 572 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 OR2T33Q8NG76 320 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 OR10H5Q8NGA6 315 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 TEX47Q8TBZ9 253 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 C11orf40Q8WZ69 217 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 SLCO4A1Q96BD0 722 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 COX4I2Q96KJ9 171 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 POM121L2Q96KW2 1035 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 DOK1Q99704 481 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 WACQ9BTA9 647 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 BCL2L14Q9BZR8 327 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 RACGAP1Q9H0H5 632 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 ASH2LQ9UBL3 628 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 EIF3KQ9UBQ5 218 aaKnown RBP10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 DNAJB9Q9UBS3 223 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 DUSP13Q9UII6 198 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 B9D1Q9UPM9 204 aa10.85□□□□□ -0.67
SMARCE1-218ENST00000582955 ACANP16112 2415 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 LOC100509620A0A075B734 347 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 A0A1W2PPW3 197 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 OR6C68A6NDL8 312 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 ARRDC5A6NEK1 342 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 FAM171A2A8MVW0 826 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 H3BN98 237 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 M0R233 179 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 SGCEO43556 437 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms