RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, human

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SS18-222	ENST00000582792	USP51	Q70EK9	711 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	DPPA2	Q7Z7J5	298 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	CYP4Z1	Q86W10	505 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	OFCC1	Q8IZS5	231 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	OR5J2	Q8NH18	312 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	TIMD4	Q96H15	378 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	LRGUK	Q96M69	825 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	ZNF426	Q9BUY5	554 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	BCL2L14	Q9BZR8	327 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	OR51B6	Q9H340	312 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	ANKRD19P	Q9H560	264 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	C7orf69	Q9H7B7	122 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	DECR2	Q9NUI1	292 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	OPN4	Q9UHM6	478 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	RIMS3	Q9UJD0	308 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	A4GNT	Q9UNA3	340 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	VWF	P04275	2813 aa		11.53	□□□□□ -0.56
SS18-222	ENST00000582792	DHH	O43323	396 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	TPD52L2	O43399	206 aa	Known RBP	11.52	□□□□□ -0.57
SS18-222	ENST00000582792	FARS2	O95363	451 aa	Known RBP	11.52	□□□□□ -0.57
SS18-222	ENST00000582792	PTH	P01270	115 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	MT-ND5	P03915	603 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	THY1	P04216	161 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	UCP2	P55851	309 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	MOG	Q16653	247 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	TBC1D28	Q2M2D7	210 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	TMEM53	Q6P2H8	277 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	LRFN4	Q6PJG9	635 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	SLC35D2	Q76EJ3	337 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	TSPYL5	Q86VY4	417 aa	Predicted RBP	11.52	□□□□□ -0.57
SS18-222	ENST00000582792	OR1J2	Q8NGS2	313 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	C22orf15	Q8WYQ4	148 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	GTF3A	Q92664	365 aa	Known RBP	11.52	□□□□□ -0.57
SS18-222	ENST00000582792	RAB1C	Q92928	201 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	DVL3	Q92997	716 aa	Predicted RBP	11.52	□□□□□ -0.57
SS18-222	ENST00000582792	ZNF566	Q969W8	418 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	SLC25A44	Q96H78	314 aa	Predicted RBP	11.52	□□□□□ -0.57
SS18-222	ENST00000582792	PRSS27	Q9BQR3	290 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	RNF121	Q9H920	327 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	SAP30L	Q9HAJ7	183 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	IL1RAP	Q9NPH3	570 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	NDUFAF4	Q9P032	175 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	SLC7A7	Q9UM01	511 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	POMP	Q9Y244	141 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	FAM32A	Q9Y421	112 aa	Known RBP	11.52	□□□□□ -0.57
SS18-222	ENST00000582792	PPIAL4A	Q9Y536	164 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	CACNG2	Q9Y698	323 aa		11.52	□□□□□ -0.57
SS18-222	ENST00000582792	OR6A2	O95222	327 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	IGHV3-13	P01766	116 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	MAGEA2	P43356	314 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	SMIM11A	P58511	58 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	PIN1	Q13526	163 aa	Predicted RBP	11.51	□□□□□ -0.57
SS18-222	ENST00000582792	TRAM2	Q15035	370 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	TST	Q16762	297 aa	Known RBP	11.51	□□□□□ -0.57
SS18-222	ENST00000582792	TUSC1	Q2TAM9	212 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	SLC36A2	Q495M3	483 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	NRN1L	Q496H8	165 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.51	□□□□□ -0.57
SS18-222	ENST00000582792	FAM209A	Q5JX71	171 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	TTC33	Q6PID6	262 aa	Predicted RBP	11.51	□□□□□ -0.57
SS18-222	ENST00000582792	CYP2R1	Q6VVX0	501 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	TSEN54	Q7Z6J9	526 aa	Known RBP	11.51	□□□□□ -0.57
SS18-222	ENST00000582792	FAM86B1	Q8N7N1	296 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	ICA1L	Q8NDH6	482 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	OR4K5	Q8NGD3	323 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	CCDC124	Q96CT7	223 aa	Known RBP	11.51	□□□□□ -0.57
SS18-222	ENST00000582792	ELMOD3	Q96FG2	381 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	DHRS1	Q96LJ7	313 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	ZNF347	Q96SE7	839 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	GAL3ST1	Q99999	423 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	FNDC11	Q9BVV2	318 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	TAS2R5	Q9NYW4	299 aa		11.51	□□□□□ -0.57
SS18-222	ENST00000582792	ARHGAP32	A7KAX9	2087 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	PPIAL4E	A0A075B759	164 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	PPIAL4C	A0A0B4J2A2	164 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	IQCM	A0A1B0GVH7	501 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792		A0A1W2PRQ8	180 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	PPIAL4D	F5H284	164 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	FFAR1	O14842	300 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	FABP3	P05413	133 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	PGA4	P0DJD7	388 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	PGA3	P0DJD8	388 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	PPIAL4F	P0DN26	164 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	MAK	P20794	623 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	ZNF81	P51508	661 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	LCN2	P80188	198 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	GLO1	Q04760	184 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	PLP2	Q04941	152 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	DGCR6	Q14129	220 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	FLOT2	Q14254	428 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	MELK	Q14680	651 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	FAM98B	Q52LJ0	330 aa	Known RBP	11.5	□□□□□ -0.57
SS18-222	ENST00000582792	RBMS3	Q6XE24	437 aa	Known RBP	11.5	□□□□□ -0.57
SS18-222	ENST00000582792	SLC16A14	Q7RTX9	510 aa		11.5	□□□□□ -0.57
SS18-222	ENST00000582792	RNF113B	Q8IZP6	322 aa	Known RBP	11.5	□□□□□ -0.57
SS18-222	ENST00000582792	TCRBV3S1	A0A5B6	114 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	RNF13	O43567	381 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	IGHV1-46	P01743	117 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	H1F0	P07305	194 aa	Known RBP	11.49	□□□□□ -0.57
SS18-222	ENST00000582792	MMP7	P09237	267 aa	Predicted RBP	11.49	□□□□□ -0.57

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