RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 TSTQ16762 297 aaKnown RBP17.44■□□□□ 0.38
SHMT1-209ENST00000582653 ZBED5Q49AG3 693 aa17.44■□□□□ 0.38
SHMT1-209ENST00000582653 FAM205BPQ63HN1 556 aa17.44■□□□□ 0.38
SHMT1-209ENST00000582653 ZNF774Q6NX45 483 aa17.44■□□□□ 0.38
SHMT1-209ENST00000582653 RNF148Q8N7C7 305 aa17.44■□□□□ 0.38
SHMT1-209ENST00000582653 SLC25A40Q8TBP6 338 aa17.44■□□□□ 0.38
SHMT1-209ENST00000582653 SLC7A13Q8TCU3 470 aa17.44■□□□□ 0.38
SHMT1-209ENST00000582653 MARS2Q96GW9 593 aaKnown RBP17.44■□□□□ 0.38
SHMT1-209ENST00000582653 FAM46AQ96IP4 442 aaKnown RBP17.44■□□□□ 0.38
SHMT1-209ENST00000582653 Q96M85 177 aa17.44■□□□□ 0.38
SHMT1-209ENST00000582653 LPAR2Q9HBW0 351 aa17.44■□□□□ 0.38
SHMT1-209ENST00000582653 EMC7Q9NPA0 242 aa17.44■□□□□ 0.38
SHMT1-209ENST00000582653 ABCD2Q9UBJ2 740 aa17.44■□□□□ 0.38
SHMT1-209ENST00000582653 EIF3KQ9UBQ5 218 aaKnown RBP17.44■□□□□ 0.38
SHMT1-209ENST00000582653 GRHPRQ9UBQ7 328 aa17.44■□□□□ 0.38
SHMT1-209ENST00000582653 TIMM10BQ9Y5J6 103 aa17.44■□□□□ 0.38
SHMT1-209ENST00000582653 ANK2Q01484 3957 aa17.44■□□□□ 0.38
SHMT1-209ENST00000582653 NGFP01138 241 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 ANPEPP15144 967 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 TEKQ02763 1124 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 ZNF718Q3SXZ3 478 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 MESTQ5EB52 335 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 AVPI1Q5T686 147 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 OTPQ5XKR4 325 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 GLYATQ6IB77 296 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 RINLQ6ZS11 566 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 CYP4Z1Q86W10 505 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 ALDH16A1Q8IZ83 802 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 FAM86B1Q8N7N1 296 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 IPCEF1Q8WWN9 437 aaPredicted RBP17.43■□□□□ 0.38
SHMT1-209ENST00000582653 CMTM5Q96DZ9 223 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 OR2J1Q9GZK6 312 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 FAM107BQ9H098 131 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 GRIP1Q9Y3R0 1128 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 CACNG2Q9Y698 323 aa17.43■□□□□ 0.38
SHMT1-209ENST00000582653 A0A0A6YYJ9 748 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 NDUFAB1O14561 156 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 TPD52L2O43399 206 aaKnown RBP17.42■□□□□ 0.38
SHMT1-209ENST00000582653 DIRAS1O95057 198 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 H1F0P07305 194 aaKnown RBP17.42■□□□□ 0.38
SHMT1-209ENST00000582653 CD14P08571 375 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 MSR1P21757 451 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 GCH1P30793 250 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 MVKQ03426 396 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 RFPL4BQ6ZWI9 263 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 OR51F2Q8NH61 342 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 ABHD4Q8TB40 342 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 KLF14Q8TD94 323 aaPredicted RBP17.42■□□□□ 0.38
SHMT1-209ENST00000582653 POLE4Q9NR33 117 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 DECR2Q9NUI1 292 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 ADA2Q9NZK5 511 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 NDUFAF4Q9P032 175 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 IL20RAQ9UHF4 553 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 RPS6KA6Q9UK32 745 aa17.42■□□□□ 0.38
SHMT1-209ENST00000582653 IMPA2O14732 288 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 SPRY3O43610 288 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 PTP4A3O75365 173 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 MT-ND5P03915 603 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 ITGA2P17301 1181 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 ZNF81P51508 661 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 MMP15P51511 669 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 PCBD1P61457 104 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 PPP1CBP62140 327 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 FGD3Q5JSP0 725 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 UNQ6126/PRO20091Q6UXV3 157 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 USP51Q70EK9 711 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 FAM122BQ7Z309 247 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 C1orf174Q8IYL3 243 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 FAM156AQ8NDB6 213 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 RASD2Q96D21 266 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 C7orf34Q96L11 122 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 ZNF570Q96NI8 536 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 LRRC37BQ96QE4 947 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 ANKRD19PQ9H560 264 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 OCEL1Q9H607 264 aa17.41■□□□□ 0.38
SHMT1-209ENST00000582653 FAM32AQ9Y421 112 aaKnown RBP17.41■□□□□ 0.38
SHMT1-209ENST00000582653 TRAV20A0A0B4J274 112 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 IGHV1-69-2A0A0G2JMI3 117 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 TEX13CA0A0J9YWL9 993 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 TRBV4-1A0A0J9YWV2 114 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 A0A1W2PRQ8 180 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 C12orf71A8MTZ7 269 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 XKRYO14609 159 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 IGHV1-46P01743 117 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 DGCR6Q14129 220 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 SEC23BQ15437 767 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 MBNL2Q5VZF2 373 aaKnown RBP17.4■□□□□ 0.38
SHMT1-209ENST00000582653 ACSM5Q6NUN0 579 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 THSD4Q6ZMP0 1018 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 C4orf45Q96LM5 186 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 RERGLQ9H628 205 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 METTL17Q9H7H0 456 aaPredicted RBP17.4■□□□□ 0.38
SHMT1-209ENST00000582653 SPAG4Q9NPE6 437 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 DCAF13Q9NV06 445 aaKnown RBP17.4■□□□□ 0.38
SHMT1-209ENST00000582653 SIGLEC7Q9Y286 467 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 TMEM5Q9Y2B1 443 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 V9GYQ6 96 aa17.4■□□□□ 0.38
SHMT1-209ENST00000582653 PRSS37A4D1T9 235 aa17.39■□□□□ 0.37
SHMT1-209ENST00000582653 ZSCAN5BA6NJL1 495 aa17.39■□□□□ 0.37
SHMT1-209ENST00000582653 MPZL1O95297 269 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms