RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 DMRTC1Q5HYR2 192 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 IL23RQ5VWK5 629 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 C11orf88Q6PI97 169 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 SLC16A14Q7RTX9 510 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 LCA5Q86VQ0 697 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 ANKRD46Q86W74 232 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 NDUFA11Q86Y39 141 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 PAPD5Q8NDF8 572 aaKnown RBP6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 OR4F17Q8NGA8 305 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 OR52P1PQ8NH57 321 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 ABHD4Q8TB40 342 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 WIPF2Q8TF74 440 aaPredicted RBP6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 TWIST2Q8WVJ9 160 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 SLC38A4Q969I6 547 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 MOGAT1Q96PD6 335 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 OR4F4Q96R69 305 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 CITED2Q99967 270 aaPredicted RBP6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 LRMDAQ9H2I8 198 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 CNTD2Q9H8S5 307 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 CTSZQ9UBR2 303 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 MARCOQ9UEW3 520 aaPredicted RBP6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 TAGLN3Q9UI15 199 aa6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 RPUSD1Q9UJJ7 312 aaKnown RBP6.29□□□□□ -1.4
SMARCE1-217ENST00000580654 TRAV36DV7A0A075B6V5 113 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 EXOC1LA0A1B0GW35 172 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 C5orf49A4QMS7 147 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 GOLGA6L6A8MZA4 724 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 H3BSA7 217 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 TIMM8AO60220 97 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 FBXO24O75426 580 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 SERPINI2O75830 405 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 FARS2O95363 451 aaKnown RBP6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 FSTL3O95633 263 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 CPSF4O95639 269 aaKnown RBP6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 G6PDP11413 515 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 FSTP19883 344 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 AHCYP23526 432 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 PSMB10P40306 273 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 PMELP40967 661 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 PAFAH1B1P43034 410 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 ERFP50548 548 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 NAA20P61599 178 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 HOXA4Q00056 320 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 PLP2Q04941 152 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 PUDPQ08623 228 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 GNA13Q14344 377 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 C6orf136Q5SQH8 315 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 RNF220Q5VTB9 566 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 CRIP3Q6Q6R5 217 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 NLRC3Q7RTR2 1065 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 RNF144BQ7Z419 303 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 NET1Q7Z628 596 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 PXKQ7Z7A4 578 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 DPPA2Q7Z7J5 298 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 CALHM3Q86XJ0 350 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 PTOV1Q86YD1 416 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 LRRC18Q8N456 261 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 SCAIQ8N9R8 606 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 HIPK4Q8NE63 616 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 C19orf18Q8NEA5 215 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 VPS37AQ8NEZ2 397 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 AKR7LQ8NHP1 331 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 VANGL1Q8TAA9 524 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 MAP6Q96JE9 813 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 TEX37Q96LM6 180 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 PPP3R2Q96LZ3 170 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 NAPGQ99747 312 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 SLC35A5Q9BS91 424 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 KIF17Q9P2E2 1029 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 ZNF443Q9Y2A4 671 aaPredicted RBP6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 SAR1BQ9Y6B6 198 aa6.28□□□□□ -1.4
SMARCE1-217ENST00000580654 IGHV3-64DA0A0J9YX35 117 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 BTBD17A6NE02 478 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 PLPP3O14495 311 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 QDPRP09417 244 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 FBP1P09467 338 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 PGA4P0DJD7 388 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 PGA3P0DJD8 388 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 ZNF32P17041 273 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 KITLGP21583 273 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 TNFSF4P23510 183 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 HTR2AP28223 471 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 CLDN8P56748 225 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 ARF6P62330 175 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 PSG4Q00888 419 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 HSF2Q03933 536 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 PRB3Q04118 309 aaPredicted RBP6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 LIN52Q52LA3 116 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 CFAP157Q5JU67 520 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 METTL11BQ5VVY1 283 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 DCDC5Q6ZRR9 648 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 PEX5LQ8IYB4 626 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 ANKRD42Q8N9B4 389 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 SPATA4Q8NEY3 305 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 OR8J2Q8NGG1 315 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 OR6S1Q8NH40 331 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 OR6X1Q8NH79 312 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 MZB1Q8WU39 189 aa6.27□□□□□ -1.41
SMARCE1-217ENST00000580654 MEGF10Q96KG7 1140 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms