RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 F5H5P2 479 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 SURF4O15260 269 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 FZD7O75084 574 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 ZFPL1O95159 310 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 DUX4L2P0CJ85 424 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 DUX4L3P0CJ86 424 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 DUX4L5P0CJ88 424 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 DUX4L6P0CJ89 424 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 DUX4L7P0CJ90 424 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 NEFHP12036 1026 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 CPT2P23786 658 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 CHI3L1P36222 383 aaPredicted RBP11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 RPL3P39023 403 aaKnown RBP11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 ERVK-25P63136 954 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 PUDPQ08623 228 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 DCTN2Q13561 401 aaKnown RBP11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 RPS26P11Q5JNZ5 115 aaPredicted RBP11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 CD276Q5ZPR3 534 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 DUX4L9Q6RFH8 374 aaPredicted RBP11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 ARL9Q6T311 187 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 BTN2A1Q7KYR7 527 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 OR52P1PQ8NH57 321 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 VANGL1Q8TAA9 524 aaPredicted RBP11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 SLC38A4Q969I6 547 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 TRNT1Q96Q11 434 aaKnown RBP11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 CCNB1IP1Q9NPC3 277 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 ERVK-18Q9QC07 812 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 DUX4Q9UBX2 424 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 MARCOQ9UEW3 520 aaPredicted RBP11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 CAB39Q9Y376 341 aaPredicted RBP11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 TMED5Q9Y3A6 229 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 KIAA1109Q2LD37 5005 aa11.43□□□□□ -0.58
CSNK1D-213ENST00000580446 ELOVL7A1L3X0 281 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 G3V2L1 256 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 H0YHG0 523 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 AZIN1O14977 448 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 HDAC3O15379 428 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 ADAM20O43506 726 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 GLRA3O75311 464 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 BGLAPP02818 100 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 LIPFP07098 398 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 SNRPBP14678 240 aaKnown RBP11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 ANP32AP39687 249 aaKnown RBP11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 PSG4Q00888 419 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 POU4F2Q12837 409 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 MAPK11Q15759 364 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 CFAP157Q5JU67 520 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 IL23RQ5VWK5 629 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 CRIP3Q6Q6R5 217 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 Q6ZS46 218 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 RIMKLAQ8IXN7 391 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 ADPRHL1Q8NDY3 354 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 SLC41A3Q96GZ6 507 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 MAELQ96JY0 434 aaKnown RBP11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 ZNF347Q96SE7 839 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 ASPNQ9BXN1 380 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 NPFFR1Q9GZQ6 430 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 RANBP3Q9H6Z4 567 aaPredicted RBP11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 MTHFD2LQ9H903 347 aaPredicted RBP11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 MAN2C1Q9NTJ4 1040 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 MKS1Q9NXB0 559 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 EMCNQ9ULC0 261 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 ZNF443Q9Y2A4 671 aaPredicted RBP11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 DNAJC15Q9Y5T4 150 aa11.42□□□□□ -0.58
CSNK1D-213ENST00000580446 PLPP3O14495 311 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 OR2T1O43869 369 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 PEX14O75381 377 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 DUS4LO95620 317 aaKnown RBP11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 IFNW1P05000 195 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 NR2F1P10589 423 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 EEF1B2P24534 225 aaKnown RBP11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 LIN52Q52LA3 116 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 LRRC74BQ6ZQY2 392 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 SLC35D2Q76EJ3 337 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 PEX5LQ8IYB4 626 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 LINC00482Q8N8I6 264 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 C8orf46Q8TAG6 207 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 AGR3Q8TD06 166 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 ZNF566Q969W8 418 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 C4orf45Q96LM5 186 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 ZNF607Q96SK3 696 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 SLC35A5Q9BS91 424 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 WNT5BQ9H1J7 359 aa11.41□□□□□ -0.58
CSNK1D-213ENST00000580446 LRRC30A6NM36 301 aa11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 SLC2A10O95528 541 aa11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 DUX4L4P0CJ87 422 aa11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 SERPINB9P50453 376 aa11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 PRSS12P56730 875 aa11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 ELF3P78545 371 aaPredicted RBP11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 DGCR2P98153 550 aa11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 CDONQ4KMG0 1287 aa11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 DPPA2Q7Z7J5 298 aa11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 ZER1Q7Z7L7 766 aa11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 NUDCD3Q8IVD9 361 aa11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 C10orf111Q8N326 155 aa11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 SLC7A13Q8TCU3 470 aa11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 TWIST2Q8WVJ9 160 aa11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 ST8SIA4Q92187 359 aa11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 MCHR2Q969V1 340 aa11.4□□□□□ -0.58
CSNK1D-213ENST00000580446 CDCA4Q9BXL8 241 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms