RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 LHX4Q969G2 390 aa11.68□□□□□ -0.54
PPP4R1-206ENST00000577779 TMEM19Q96HH6 336 aa11.68□□□□□ -0.54
PPP4R1-206ENST00000577779 PPP1R36Q96LQ0 422 aa11.68□□□□□ -0.54
PPP4R1-206ENST00000577779 ELOVL3Q9HB03 270 aa11.68□□□□□ -0.54
PPP4R1-206ENST00000577779 FBLN5Q9UBX5 448 aa11.68□□□□□ -0.54
PPP4R1-206ENST00000577779 VPREB3Q9UKI3 123 aa11.68□□□□□ -0.54
PPP4R1-206ENST00000577779 FOXJ3Q9UPW0 622 aa11.68□□□□□ -0.54
PPP4R1-206ENST00000577779 FAM96BQ9Y3D0 163 aa11.68□□□□□ -0.54
PPP4R1-206ENST00000577779 USH1CQ9Y6N9 552 aa11.68□□□□□ -0.54
PPP4R1-206ENST00000577779 ANKRD61A6NGH8 418 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 E9PBE3 544 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 MMP9P14780 707 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 ZNF32P17041 273 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 KRT4P19013 534 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 CASQ1P31415 396 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 DSTNP60981 165 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 CD69Q07108 199 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 ZNF404Q494X3 552 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 CEP85LQ5SZL2 805 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 METTL11BQ5VVY1 283 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 FAM91A1Q658Y4 838 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 C4orf33Q8N1A6 199 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 ZNF420Q8TAQ5 688 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 C10orf82Q8WW14 230 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 CFHR4Q92496 578 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 MCHR2Q969V1 340 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 WDFY2Q96P53 400 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 KRTAP17-1Q9BYP8 105 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 AKTIPQ9H8T0 292 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 SIAEQ9HAT2 523 aa11.67□□□□□ -0.54
PPP4R1-206ENST00000577779 TMEM247A6NEH6 219 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 RNF13O43567 381 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 ICMTO60725 284 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 PPP1R3DO95685 299 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 MT-ATP6P00846 226 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 IGHG1P01857 330 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 GSTM3P21266 225 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 EPHA3P29320 983 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 PSG4Q00888 419 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 NSUN5P1Q3KNT7 163 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 LYPD2Q6UXB3 125 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 LYG1Q8N1E2 194 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 C4orf45Q96LM5 186 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 TECTBQ96PL2 329 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 ZNF347Q96SE7 839 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 OCSTAMPQ9BR26 566 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 SIGLEC9Q9Y336 463 aa11.66□□□□□ -0.54
PPP4R1-206ENST00000577779 DNAH1Q9P2D7 4330 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 LRRC30A6NM36 301 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 LIPFP07098 398 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 CDAP32320 146 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 MVDP53602 400 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 NCALDP61601 193 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 CKAP4Q07065 602 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 HIST3H3Q16695 136 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 CD276Q5ZPR3 534 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 ARL9Q6T311 187 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 ZNF841Q6ZN19 808 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 PDZD9Q8IXQ8 264 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 ALDH16A1Q8IZ83 802 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 ATG16L2Q8NAA4 619 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 TEX37Q96LM6 180 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 ZIM3Q96PE6 472 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 OR52E6Q96RD3 313 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 ZNF607Q96SK3 696 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 PPA2Q9H2U2 334 aa11.65□□□□□ -0.54
PPP4R1-206ENST00000577779 RNASEK-C17orf49H0YIS7 233 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 KITLGP21583 273 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 SERPINB5P36952 375 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 EFNB2P52799 333 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 NME5P56597 212 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 ERVK-25P63136 954 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 MRPS34P82930 218 aaKnown RBP11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 LRRC74AQ0VAA2 488 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 COX10Q12887 443 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 FAM201AQ5SY85 155 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 C11orf88Q6PI97 169 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 DCDC5Q6ZRR9 648 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 C1orf122Q6ZSJ8 110 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 C1orf87Q8N0U7 546 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 KLHDC1Q8N7A1 406 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 PNLDC1Q8NA58 520 aaKnown RBP11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 NPEPL1Q8NDH3 523 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 R3HDM4Q96D70 268 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 TMEM43Q9BTV4 400 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 MMP28Q9H239 520 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 POFUT1Q9H488 388 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 FN3KRPQ9HA64 309 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 TMEM27Q9HBJ8 222 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 TAS2R5Q9NYW4 299 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 DNAH7Q8WXX0 4024 aa11.64□□□□□ -0.55
PPP4R1-206ENST00000577779 A0A0B4J2E0 115 aa11.63□□□□□ -0.55
PPP4R1-206ENST00000577779 IGHV3-64DA0A0J9YX35 117 aa11.63□□□□□ -0.55
PPP4R1-206ENST00000577779 A0A1B0GX12 115 aa11.63□□□□□ -0.55
PPP4R1-206ENST00000577779 RFXANKO14593 260 aa11.63□□□□□ -0.55
PPP4R1-206ENST00000577779 FSTL3O95633 263 aa11.63□□□□□ -0.55
PPP4R1-206ENST00000577779 ABHD16AO95870 558 aa11.63□□□□□ -0.55
PPP4R1-206ENST00000577779 FBP1P09467 338 aa11.63□□□□□ -0.55
PPP4R1-206ENST00000577779 SLC6A2P23975 617 aa11.63□□□□□ -0.55
PPP4R1-206ENST00000577779 NPY4RP50391 375 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms