RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 SLC40A1Q9NP59 571 aa1.12□□□□□ -2.23
TOP2A-202ENST00000577541 ZDHHC4Q9NPG8 344 aa1.12□□□□□ -2.23
TOP2A-202ENST00000577541 ACP6Q9NPH0 428 aa1.12□□□□□ -2.23
TOP2A-202ENST00000577541 KCNJ16Q9NPI9 418 aa1.12□□□□□ -2.23
TOP2A-202ENST00000577541 TMEM9BQ9NQ34 198 aa1.12□□□□□ -2.23
TOP2A-202ENST00000577541 AGPAT4Q9NRZ5 378 aa1.12□□□□□ -2.23
TOP2A-202ENST00000577541 DDX18Q9NVP1 670 aaKnown RBP1.12□□□□□ -2.23
TOP2A-202ENST00000577541 GGA2Q9UJY4 613 aa1.12□□□□□ -2.23
TOP2A-202ENST00000577541 IKZF2Q9UKS7 526 aa1.12□□□□□ -2.23
TOP2A-202ENST00000577541 ING4Q9UNL4 249 aa1.12□□□□□ -2.23
TOP2A-202ENST00000577541 IKBKGQ9Y6K9 419 aa1.12□□□□□ -2.23
TOP2A-202ENST00000577541 MROH7-TTC4A0A0A0MT08 1334 aa1.12□□□□□ -2.23
TOP2A-202ENST00000577541 TTC41PQ6P2S7 1318 aa1.12□□□□□ -2.23
TOP2A-202ENST00000577541 IGSF9BQ9UPX0 1349 aa1.12□□□□□ -2.23
TOP2A-202ENST00000577541 PLA2R1Q13018 1463 aa1.12□□□□□ -2.23
TOP2A-202ENST00000577541 IGKV1-8A0A0C4DH67 115 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 NCBP2LA6PVI3 153 aaKnown RBP1.11□□□□□ -2.23
TOP2A-202ENST00000577541 GOLGA8SH3BPF8 625 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 SLC9A3R1O14745 358 aaPredicted RBP1.11□□□□□ -2.23
TOP2A-202ENST00000577541 ZBTB5O15062 677 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 LSM1O15116 133 aaKnown RBP1.11□□□□□ -2.23
TOP2A-202ENST00000577541 AKR7A2O43488 359 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 CIB2O75838 187 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 ERLIN2O94905 339 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 RCBTB2O95199 551 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 FTH1P02794 183 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 BGLAPP02818 100 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 C2P06681 752 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 EIF4EP06730 217 aaKnown RBP1.11□□□□□ -2.23
TOP2A-202ENST00000577541 RHOXF2BP0C7M4 288 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 ACSM4P0C7M7 580 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 UBTFL6P0CB48 400 aaPredicted RBP1.11□□□□□ -2.23
TOP2A-202ENST00000577541 OR8G3PP0DMU2 310 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 RNASE2P10153 161 aaKnown RBP1.11□□□□□ -2.23
TOP2A-202ENST00000577541 PRPS2P11908 318 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 CTRB1P17538 263 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 GABRG2P18507 467 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 BCKDHBP21953 392 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 CMA1P23946 247 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 OR1E1P30953 314 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 SERPINB5P36952 375 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 NAA10P41227 235 aaPredicted RBP1.11□□□□□ -2.23
TOP2A-202ENST00000577541 CDKN2BP42772 138 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 OR1G1P47890 313 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 SERPINB8P50452 374 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 YWHAGP61981 247 aaKnown RBP eCLIP1.11□□□□□ -2.23
TOP2A-202ENST00000577541 LIPEQ05469 1076 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 TTLL9Q3SXZ7 439 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 ZBED5Q49AG3 693 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 PTPN20Q4JDL3 420 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 PRR9Q5T870 116 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 CARD17Q5XLA6 110 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 SLC25A34Q6PIV7 304 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 METAP1DQ6UB28 335 aaPredicted RBP1.11□□□□□ -2.23
TOP2A-202ENST00000577541 C12orf54Q6X4T0 127 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 ZNF493Q6ZR52 646 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 STRADAQ7RTN6 431 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 NANOGNBQ7Z5D8 188 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 TGIF2LXQ8IUE1 241 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 CBLN2Q8IUK8 224 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 UBALD2Q8IYN6 164 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 EID2Q8N6I1 236 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 FAM86B1Q8N7N1 296 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 OR10J6PQ8NGY7 276 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 AGR3Q8TD06 166 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 MCOLN3Q8TDD5 553 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 CAPSLQ8WWF8 208 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 CCDC126Q96EE4 140 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 LINC00477Q96M19 166 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 SLC39A3Q9BRY0 314 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 TEKT3Q9BXF9 490 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 OR2AG1Q9H205 316 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 RPP21Q9H633 154 aaKnown RBP1.11□□□□□ -2.23
TOP2A-202ENST00000577541 NEK6Q9HC98 313 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 GLRX2Q9NS18 164 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 EXD2Q9NVH0 621 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 GPATCH2LQ9NWQ4 482 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 AHSPQ9NZD4 102 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 PDP1Q9P0J1 537 aaPredicted RBP1.11□□□□□ -2.23
TOP2A-202ENST00000577541 GCNT4Q9P109 453 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 RABL2AQ9UBK7 228 aaPredicted RBP1.11□□□□□ -2.23
TOP2A-202ENST00000577541 ZNF629Q9UEG4 869 aaPredicted RBP1.11□□□□□ -2.23
TOP2A-202ENST00000577541 PCYOX1Q9UHG3 505 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 NUP50Q9UKX7 468 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 SLC17A4Q9Y2C5 497 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 UBIAD1Q9Y5Z9 338 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 KIF26AQ9ULI4 1882 aaPredicted RBP1.11□□□□□ -2.23
TOP2A-202ENST00000577541 UBN2Q6ZU65 1347 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 FANCIQ9NVI1 1328 aa1.11□□□□□ -2.23
TOP2A-202ENST00000577541 KANK1Q14678 1352 aa1.1□□□□□ -2.23
TOP2A-202ENST00000577541 TRAV40A0A0B4J280 105 aa1.1□□□□□ -2.23
TOP2A-202ENST00000577541 GLYATL1P3A0A0U1RQE8 302 aa1.1□□□□□ -2.23
TOP2A-202ENST00000577541 KIR2DS1A0A191URI9 304 aa1.1□□□□□ -2.23
TOP2A-202ENST00000577541 ZNF705GA8MUZ8 300 aaPredicted RBP1.1□□□□□ -2.23
TOP2A-202ENST00000577541 SMKR1H3BMG3 65 aa1.1□□□□□ -2.23
TOP2A-202ENST00000577541 H7C1H1 209 aa1.1□□□□□ -2.23
TOP2A-202ENST00000577541 L7N2F9 121 aa1.1□□□□□ -2.23
TOP2A-202ENST00000577541 SGK1O00141 431 aa1.1□□□□□ -2.23
TOP2A-202ENST00000577541 NUPL2O15504 423 aaKnown RBP1.1□□□□□ -2.23
TOP2A-202ENST00000577541 MGRN1O60291 552 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms