RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 OR2Z1Q8NG97 314 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 VANGL1Q8TAA9 524 aaPredicted RBP9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 NABP1Q96AH0 204 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 THOC1Q96FV9 657 aaKnown RBP9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 SAMD8Q96LT4 415 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 IKZF5Q9H5V7 419 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 INIPQ9NRY2 104 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 MAN2C1Q9NTJ4 1040 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 DCAF16Q9NXF7 216 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 PPP1R3CQ9UQK1 317 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 UGT2A1Q9Y4X1 527 aa9.8□□□□□ -0.84
CTDNEP1-212ENST00000576613 NPIPB13A6NJU9 1138 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 NPIPB4C9JG80 1138 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 F5H0A9 414 aaPredicted RBP9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 M0QZ24 198 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 LYPD3O95274 346 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 GPANK1O95872 356 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 MT-ND1P03886 318 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 THY1P04216 161 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 CRYBA1P05813 215 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 IGHV4-38-2P0DP08 117 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 TUBG1P23258 451 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 OMGP23515 440 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 CPT2P23786 658 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 PAX8Q06710 450 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 ZMYND11Q15326 602 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 SPRNQ5BIV9 151 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 EPGNQ6UW88 154 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 LRRN1Q6UXK5 716 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 RBM45Q8IUH3 476 aaKnown RBP9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 FUNDC1Q8IVP5 155 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 GPR32P1Q8NGA4 272 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 OR4F5Q8NH21 305 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 SLC26A7Q8TE54 656 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 WFDC12Q8WWY7 111 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 NSMAFQ92636 917 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 UPRTQ96BW1 309 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 C4orf45Q96LM5 186 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 CPPED1Q9BRF8 314 aaPredicted RBP9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 SSBP3Q9BWW4 388 aaPredicted RBP9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 OR2H1Q9GZK4 316 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 PCDHAC1Q9H158 963 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 BEX1Q9HBH7 125 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 MEPEQ9NQ76 525 aaPredicted RBP9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 TUBG2Q9NRH3 451 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 NKIRAS1Q9NYS0 192 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 IL19Q9UHD0 177 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 NDRG4Q9ULP0 352 aaKnown RBP9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 TIMM10BQ9Y5J6 103 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 USH1CQ9Y6N9 552 aa9.79□□□□□ -0.84
CTDNEP1-212ENST00000576613 IGHV3OR16-10A0A075B7F0 116 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 TRAV40A0A0B4J280 105 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 IFNL4K9M1U5 179 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 M0QX08 132 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 HOXA3O43365 443 aaPredicted RBP9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 OR7A10O76100 309 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 ABHD16AO95870 558 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 PLATP00750 562 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 NGFP01138 241 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 CST2P09228 141 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 RPS2P15880 293 aaKnown RBP9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 FUT1P19526 365 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 LAP3P28838 519 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 CD80P33681 288 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 AQP2P41181 271 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 RBM34P42696 430 aaKnown RBP9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 SLC18A1P54219 525 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 FMODQ06828 376 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 PSG7Q13046 419 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 ARMC4Q5T2S8 1044 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 BRICD5Q6PL45 260 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 PATL1Q86TB9 770 aaKnown RBP9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 PTOV1Q86YD1 416 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 SLC30A8Q8IWU4 369 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 OR4D11Q8NGI4 311 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 FNDC8Q8TC99 324 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 RASSF5Q8WWW0 418 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 TAF15Q92804 592 aaKnown RBP eCLIP9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 ZDHHC16Q969W1 377 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 ZBTB9Q96C00 473 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 NMD3Q96D46 503 aaKnown RBP9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 PLEKHA8Q96JA3 519 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 SIGLEC11Q96RL6 698 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 CCT8L2Q96SF2 557 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 WNT5BQ9H1J7 359 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 MMP27Q9H306 513 aa9.78□□□□□ -0.84
CTDNEP1-212ENST00000576613 IGHV2-70DA0A0C4DH43 119 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 FAM181BA6NEQ2 426 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 CEACAM18A8MTB9 384 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 C12orf71A8MTZ7 269 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 TMEM178BH3BS89 294 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 TIMM23O14925 209 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 IGF2P01344 180 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 RAG2P55895 527 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 GNB2P62879 340 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 HNRNPA0Q13151 305 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 INTS11Q5TA45 600 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 FAM205BPQ63HN1 556 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 ZNF774Q6NX45 483 aa9.77□□□□□ -0.85
CTDNEP1-212ENST00000576613 SYT9Q86SS6 491 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms