RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ZFPL1O95159 310 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 NME1P15531 152 aaKnown RBP11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 RPA2P15927 270 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 ZNF266Q14584 549 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 CD300LGQ6UXG3 332 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 IL34Q6ZMJ4 242 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 PRSS35Q8N3Z0 413 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 MARCH1Q8TCQ1 289 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 PRAMEF27A3QJZ7 478 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 CDC42EP2O14613 210 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 CD160O95971 181 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 ALOX5APP20292 161 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 FCGR2CP31995 323 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 SFTPDP35247 375 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 MAT1AQ00266 395 aaKnown RBP11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 PJVKQ0ZLH3 352 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 ZNF273Q14593 569 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 DCXRQ7Z4W1 244 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 TSTD1Q8NFU3 115 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 WDR34Q96EX3 536 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 KCNJ15Q99712 375 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 TUBG2Q9NRH3 451 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 PLEK2Q9NYT0 353 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 OPN4Q9UHM6 478 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 SLC17A2O00624 439 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 FGF17O60258 216 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 TXNDC12O95881 172 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 SEMG1P04279 462 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 GLAP06280 429 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 ZNF136P52737 540 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 TLE4Q04727 773 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 EGR3Q06889 387 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 DLX2Q07687 328 aaPredicted RBP11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 DMKNQ6E0U4 476 aaPredicted RBP11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 ALKBH2Q6NS38 261 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 ADIPOR2Q86V24 386 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR2A1Q8NGT9 310 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 OR6K3Q8NGY3 331 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 RAB39BQ96DA2 213 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 PHYHIPLQ96FC7 376 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 NPAS1Q99742 590 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 JAM3Q9BX67 310 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 LYRM4Q9HD34 91 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 SIRT3Q9NTG7 399 aaPredicted RBP11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 DNMT3BQ9UBC3 853 aaKnown RBP11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 WASF3Q9UPY6 502 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 ADAMTSL1Q8N6G6 1762 aa11.96□□□□□ -0.49
PCDHGB3-201ENST00000576222 HMGB3O15347 200 aaKnown RBP11.96□□□□□ -0.5
PCDHGB3-201ENST00000576222 PI3P19957 117 aa11.96□□□□□ -0.5
PCDHGB3-201ENST00000576222 HRH1P35367 487 aa11.96□□□□□ -0.5
PCDHGB3-201ENST00000576222 LSM11P83369 360 aaKnown RBP eCLIP11.96□□□□□ -0.5
PCDHGB3-201ENST00000576222 TEX19Q8NA77 164 aa11.96□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR5L2Q8NGL0 311 aa11.96□□□□□ -0.5
PCDHGB3-201ENST00000576222 NINJ1Q92982 152 aa11.96□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR5B2Q96R09 309 aa11.96□□□□□ -0.5
PCDHGB3-201ENST00000576222 ENKD1Q9H0I2 346 aa11.96□□□□□ -0.5
PCDHGB3-201ENST00000576222 PPIL1Q9Y3C6 166 aa11.96□□□□□ -0.5
PCDHGB3-201ENST00000576222 DOCK5Q9H7D0 1870 aa11.96□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZNFX1Q9P2E3 1918 aaKnown RBP11.96□□□□□ -0.5
PCDHGB3-201ENST00000576222 UTS2O95399 124 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 RPL12P30050 165 aaKnown RBP11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 DEFB103AP81534 67 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZP2Q05996 745 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 DHRS2Q13268 280 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 MANEAQ5SRI9 462 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 FAM69BQ5VUD6 431 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 USP53Q70EK8 1073 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 STPG2Q8N412 459 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 NUDT22Q9BRQ3 303 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 MRPS18AQ9NVS2 196 aaKnown RBP11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 GPR137BO60478 399 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 CD37P11049 281 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 AMER3Q8N944 861 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 EDAQ92838 391 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 LINC00615Q96LM1 132 aaPredicted RBP11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 NAA11Q9BSU3 229 aaPredicted RBP11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 BANF2Q9H503 90 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 COA3Q9Y2R0 106 aaPredicted RBP11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 KIR2DS5A0A0G2JLQ3 304 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 A0A0G2JNG1 304 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 TMEM218A2RU14 115 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 KIR2DS3K7RE56 304 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZNF728P0DKX0 622 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR1D4P47884 311 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 RPS18P62269 152 aaKnown RBP11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 RAB1AP62820 205 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 MRPS34P82930 218 aaKnown RBP11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 EIF4EBP2Q13542 120 aaPredicted RBP11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 KLF9Q13886 244 aaPredicted RBP11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 KIR2DS5Q14953 304 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 THSD4Q6ZMP0 1018 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 SLC16A13Q7RTY0 426 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 AKR1E2Q96JD6 320 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZNF286AQ9HBT8 521 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 ING1Q9UK53 422 aaPredicted RBP11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 BLACEA4D250 179 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 TRAPPC6AO75865 159 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 BPNT1O95861 308 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 SCGB1D1O95968 90 aa11.95□□□□□ -0.5
PCDHGB3-201ENST00000576222 IGHG1P01857 330 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms