RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 CNRIP1Q96F85 164 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-212ENST00000574799 PTCHD1Q96NR3 888 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 OPA3Q9H6K4 179 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 SDHAF3Q9NRP4 125 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 A0A1B0GTH9 108 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 CPED1A4D0V7 1026 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 K7EQS6 105 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 AIFM1O95831 613 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 PMP2P02689 132 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 RAB5AP20339 215 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 G0S2P27469 103 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 HSD17B2P37059 387 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 RPS27P42677 84 aaKnown RBP8.69□□□□□ -1.02
CCDC40-212ENST00000574799 DNASE1L1P49184 302 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 NKX6-1P78426 367 aaPredicted RBP8.69□□□□□ -1.02
CCDC40-212ENST00000574799 FUT5Q11128 374 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 FZD5Q13467 585 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 GPM6BQ13491 265 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF345Q14585 488 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 RHEBQ15382 184 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 AWAT1Q58HT5 328 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 INTS14Q96SY0 518 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 TREM2Q9NZC2 230 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 METTL1Q9UBP6 276 aaKnown RBP8.69□□□□□ -1.02
CCDC40-212ENST00000574799 C7orf77A4D0Y5 90 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 C10orf142B7Z368 130 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 UBE2CO00762 179 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 GPR37O15354 613 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 P2RX6O15547 441 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 SCGB1D2O95969 90 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 GJA4P35212 333 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 GPX4P36969 197 aaPredicted RBP8.69□□□□□ -1.02
CCDC40-212ENST00000574799 EFNB2P52799 333 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 Q6ZRG5 221 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 RNF113BQ8IZP6 322 aaKnown RBP8.69□□□□□ -1.02
CCDC40-212ENST00000574799 KISS1RQ969F8 398 aaPredicted RBP8.69□□□□□ -1.02
CCDC40-212ENST00000574799 PIK3IP1Q96FE7 263 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 SLC35A4Q96G79 324 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 Q96M85 177 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 FAM117AQ9C073 453 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 S1PR5Q9H228 398 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 SFXN1Q9H9B4 322 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 BARX1Q9HBU1 254 aaPredicted RBP8.69□□□□□ -1.02
CCDC40-212ENST00000574799 MBNL1Q9NR56 388 aaKnown RBP8.69□□□□□ -1.02
CCDC40-212ENST00000574799 CLEC1BQ9P126 229 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 RCC2Q9P258 522 aaKnown RBP8.69□□□□□ -1.02
CCDC40-212ENST00000574799 MSRAQ9UJ68 235 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 SIGLEC7Q9Y286 467 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 MMP24Q9Y5R2 645 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 TMEM235A6NFC5 223 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 COLCA2A8K830 154 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 CYCSP99999 105 aaKnown RBP8.69□□□□□ -1.02
CCDC40-212ENST00000574799 SQSTM1Q13501 440 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 PPP1R1AQ13522 171 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 VWA2Q5GFL6 755 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 ATPAF1Q5TC12 328 aaPredicted RBP8.69□□□□□ -1.02
CCDC40-212ENST00000574799 HIST2H3AQ71DI3 136 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 PRRT1Q99946 306 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 TCEAL2Q9H3H9 227 aaPredicted RBP8.69□□□□□ -1.02
CCDC40-212ENST00000574799 SEC61A2Q9H9S3 476 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 LHX9Q9NQ69 397 aa8.69□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF223Q9UK11 482 aaPredicted RBP8.69□□□□□ -1.02
CCDC40-212ENST00000574799 TBC1D3DA0A087WVF3 549 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 TBC1D3IA0A087WXS9 549 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 A0A087X0M5 115 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 TBC1D3KA0A087X1G2 549 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 A0A1B0GX30 115 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 A0A1W2PPV9 198 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 A0A1W2PR48 441 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 PMS2P1A4D2B8 440 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 RNF222A6NCQ9 220 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 TBC1D3BA6NDS4 549 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 CXorf65A6NEN9 183 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 TBC1D3FA6NER0 549 aaPredicted RBP8.68□□□□□ -1.02
CCDC40-212ENST00000574799 TBC1D3LB9A6J9 549 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 MCIDASD6RGH6 385 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 PPP1R2P9O14990 202 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 CTAG2O75638 210 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 AGR2O95994 175 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 IGHV2-70P01814 119 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 TBC1D3HP0C7X1 549 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 TLX1P31314 330 aaPredicted RBP8.68□□□□□ -1.02
CCDC40-212ENST00000574799 RGS19P49795 217 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 PLA2G7Q13093 441 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 C2orf76Q3KRA6 126 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 TBC1D3GQ6DHY5 549 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 TBC1D3CQ6IPX1 549 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 TMEM184AQ6ZMB5 413 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 TBC1D3Q8IZP1 549 aaPredicted RBP8.68□□□□□ -1.02
CCDC40-212ENST00000574799 OR4K14Q8NGD5 310 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 OR13C9Q8NGT0 318 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 SFXN5Q8TD22 340 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 RASD2Q96D21 266 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 PCBD2Q9H0N5 130 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 TAF9BQ9HBM6 251 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 THAP10Q9P2Z0 257 aaPredicted RBP8.68□□□□□ -1.02
CCDC40-212ENST00000574799 IGKV1-8A0A0C4DH67 115 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 ARGFXA6NJG6 315 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 SULT2B1O00204 365 aa8.68□□□□□ -1.02
CCDC40-212ENST00000574799 ALOX12BO75342 701 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms