RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 TMEM171Q8WVE6 324 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 NRGNQ92686 78 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 FBXO17Q96EF6 278 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 MS4A3Q96HJ5 214 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 ZNF75AQ96N20 296 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 FOXN4Q96NZ1 517 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 C9orf16Q9BUW7 83 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 CXorf56Q9H5V9 222 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 NOX3Q9HBY0 568 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 SLC25A19Q9HC21 320 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 EMC7Q9NPA0 242 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 KCNG2Q9UJ96 466 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 POLQO75417 2590 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 ERICH4A6NGS2 130 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 PRR23D1E9PI22 279 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 DCTN6O00399 190 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 ATE1O95260 518 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 BAG2O95816 211 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 PRR23D2P0DMB1 279 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 ZNF823P16415 610 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 STOMP27105 288 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 FMO3P31513 532 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 SLC25A1P53007 311 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 RAD23AP54725 363 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 PSG4Q00888 419 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 TEKQ02763 1124 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 DAG1Q14118 895 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 ENDOGQ14249 297 aaKnown RBP11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 PTGES3Q15185 160 aaKnown RBP11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 SNAPC1Q16533 368 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 ACSM5Q6NUN0 579 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 ARL9Q6T311 187 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 MUC15Q8N387 334 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 GJC3Q8NFK1 279 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 OR2AJ1Q8NGZ0 328 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 C11orf40Q8WZ69 217 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 NEUROG1Q92886 237 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 OTULINQ96BN8 352 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 DDOQ99489 341 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 OR2H1Q9GZK4 316 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 LIME1Q9H400 295 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 FN3KQ9H479 309 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 BEX4Q9NWD9 120 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 EIF3KQ9UBQ5 218 aaKnown RBP11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 NDRG4Q9ULP0 352 aaKnown RBP11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 LAMP3Q9UQV4 416 aa11.07□□□□□ -0.64
TRAPPC1-206ENST00000573989 E7EQL1 145 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 SURF4O15260 269 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 SGCEO43556 437 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 DOK2O60496 412 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 SNAP29O95721 258 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 GAAP10253 952 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 COX5BP10606 129 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 ZNF35P13682 527 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 SPI1P17947 270 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 CD53P19397 219 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 APEX1P27695 318 aaKnown RBP11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 CALCRP30988 508 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 TTKP33981 857 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 RAD52P43351 418 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 GDI2P50395 445 aaKnown RBP11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 PPP2R2BQ00005 443 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 ZNF362Q5T0B9 420 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 UGT2A3Q6UWM9 527 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 MYPOPQ86VE0 399 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 ZNF584Q8IVC4 421 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 C1orf174Q8IYL3 243 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 SLC26A10Q8NG04 563 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 OR9Q1Q8NGQ5 310 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 OR6K6Q8NGW6 343 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 EME1Q96AY2 570 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 MBD6Q96DN6 1003 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 CIB1Q99828 191 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 NMNAT2Q9BZQ4 307 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 GRIP2Q9C0E4 1043 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 ZNF442Q9H7R0 627 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 CA10Q9NS85 328 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 PLEK2Q9NYT0 353 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 TVP23BQ9NYZ1 205 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 ASH2LQ9UBL3 628 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 FBXO9Q9UK97 447 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 LRBAP50851 2863 aa11.06□□□□□ -0.64
TRAPPC1-206ENST00000573989 CYSRT1A8MQ03 144 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 FAM171A2A8MVW0 826 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 PRODHO43272 600 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 SMPD2O60906 423 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 MITFO75030 526 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 MPZL1O95297 269 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 SCG5P05408 212 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 DANCRP0C864 163 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 CCNOP22674 350 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 NR4A1P22736 598 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 PCSK6P29122 969 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 PYCR1P32322 319 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 ALDH3A2P51648 485 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 ADAM8P78325 824 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 SNTB2Q13425 540 aaKnown RBP11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 DEFB113Q30KQ7 82 aa11.05□□□□□ -0.64
TRAPPC1-206ENST00000573989 TMEM236Q5W0B7 351 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms