RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 ARPC4-TTLL3A0A0A6YYG9 625 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 TRIM64A6NGJ6 449 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 TOR1AO14656 332 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 ENPP1P22413 925 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 NLRC3Q7RTR2 1065 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 KIAA1958Q8N8K9 716 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 FAM213BQ8TBF2 198 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 CPT1CQ8TCG5 803 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 TSLPQ969D9 159 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 TCEAL7Q9BRU2 100 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 PTDSS2Q9BVG9 487 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 OR11A1Q9GZK7 315 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 NECAP2Q9NVZ3 263 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 KIF25Q9UIL4 384 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 NXT1Q9UKK6 140 aaKnown RBP13.98□□□□□ -0.17
CIITA-204ENST00000570546 PRRC2BQ5JSZ5 2229 aaKnown RBP13.98□□□□□ -0.17
CIITA-204ENST00000570546 TMEM235A6NFC5 223 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 MCRIP1C9JLW8 97 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 OR2F2O95006 317 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 TPOP07202 933 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 OR2F1Q13607 317 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 INSL4Q14641 139 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 SLC17A1Q14916 467 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 CORO6Q6QEF8 472 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 SECTM1Q8WVN6 248 aa13.98□□□□□ -0.17
CIITA-204ENST00000570546 OR6C76A6NM76 312 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 ZNF136P52737 540 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 RPP30P78346 268 aaKnown RBP13.97□□□□□ -0.17
CIITA-204ENST00000570546 TMEM81Q6P7N7 255 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 PRSS35Q8N3Z0 413 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 OR56B2PQ8NGI1 322 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 GCDHQ92947 438 aaPredicted RBP13.97□□□□□ -0.17
CIITA-204ENST00000570546 JAM3Q9BX67 310 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 SLC22A13Q9Y226 551 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 COL4A5P29400 1685 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 CD3DP04234 171 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 CARD18P57730 90 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 CD300CQ08708 224 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 GPNMBQ14956 572 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 OR10R2Q8NGX6 335 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 CPNE4Q96A23 557 aaPredicted RBP13.97□□□□□ -0.17
CIITA-204ENST00000570546 ZNF845Q96IR2 970 aaPredicted RBP13.97□□□□□ -0.17
CIITA-204ENST00000570546 OCSTAMPQ9BR26 566 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 WWTR1Q9GZV5 400 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 PIGMQ9H3S5 423 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 SLCO1C1Q9NYB5 712 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 KCND3Q9UK17 655 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 HSPB6O14558 160 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 TXNL1O43396 289 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 CISD3P0C7P0 127 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 ICAM2P13598 275 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 TMEM196Q5HYL7 178 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 LINC01555Q8NAE3 123 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 KLK11Q9UBX7 282 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 CSAG2Q9Y5P2 127 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 CER1O95813 267 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 LIMS3P0CW19 117 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 LIMS4P0CW20 117 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 SRPXP78539 464 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 TP53I13Q8NBR0 393 aaPredicted RBP13.97□□□□□ -0.17
CIITA-204ENST00000570546 SSX3Q99909 188 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 ERVMER34-1Q9H9K5 563 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 SIGLEC7Q9Y286 467 aa13.97□□□□□ -0.17
CIITA-204ENST00000570546 NOSIPQ9Y314 301 aaKnown RBP13.97□□□□□ -0.17
CIITA-204ENST00000570546 PUS1Q9Y606 427 aaKnown RBP eCLIP13.97□□□□□ -0.17
CIITA-204ENST00000570546 RPS10-NUDT3A0A1W2PQS6 291 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 PHF1O43189 567 aaPredicted RBP13.96□□□□□ -0.17
CIITA-204ENST00000570546 SSX4O60224 188 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 SLC34A2O95436 690 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 RPS10P46783 165 aaKnown RBP13.96□□□□□ -0.17
CIITA-204ENST00000570546 CAPZBP47756 277 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 ARG2P78540 354 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 VWA2Q5GFL6 755 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 LILRA6Q6PI73 481 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 TMPRSS11FQ6ZWK6 438 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 OR4N2Q8NGD1 307 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 LRRC37AA6NMS7 1700 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 GMDSO60547 372 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 GALP22466 123 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 CAMK2BQ13554 666 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 RBM39Q14498 530 aaKnown RBP13.96□□□□□ -0.17
CIITA-204ENST00000570546 CLEC1AQ8NC01 280 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 OR2G2Q8NGZ5 317 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 ING1Q9UK53 422 aaPredicted RBP13.96□□□□□ -0.17
CIITA-204ENST00000570546 PCYT1BQ9Y5K3 369 aaPredicted RBP13.96□□□□□ -0.17
CIITA-204ENST00000570546 R4GMQ9 66 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 UBE2KP61086 200 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 RAB31Q13636 194 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 AVPI1Q5T686 147 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 C10orf111Q8N326 155 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 SLC25A43Q8WUT9 341 aaPredicted RBP13.96□□□□□ -0.17
CIITA-204ENST00000570546 TXNIPQ9H3M7 391 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 C20orf141Q9NUB4 165 aa13.96□□□□□ -0.17
CIITA-204ENST00000570546 A0A0B4J2E0 115 aa13.96□□□□□ -0.18
CIITA-204ENST00000570546 A0A1B0GX12 115 aa13.96□□□□□ -0.18
CIITA-204ENST00000570546 D6RAR5 112 aa13.96□□□□□ -0.18
CIITA-204ENST00000570546 CCR5P51681 352 aa13.96□□□□□ -0.18
CIITA-204ENST00000570546 AADACL3Q5VUY0 350 aa13.96□□□□□ -0.18
CIITA-204ENST00000570546 OTPQ5XKR4 325 aa13.96□□□□□ -0.18
CIITA-204ENST00000570546 WDR5BQ86VZ2 330 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms