RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 C17orf78Q8N4C9 275 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 C1orf162Q8NEQ5 155 aaPredicted RBP5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC26A10Q8NG04 563 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 OR1K1Q8NGR3 316 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 FBLIM1Q8WUP2 373 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 C11orf40Q8WZ69 217 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 NMD3Q96D46 503 aaKnown RBP5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 STARD4Q96DR4 205 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 LGALS12Q96DT0 336 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 CCDC120Q96HB5 630 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 TBX5Q99593 518 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 TEAD3Q99594 435 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 YTHDF1Q9BYJ9 559 aaKnown RBP5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 RNF121Q9H920 327 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 WDR76Q9H967 626 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 SIAEQ9HAT2 523 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 ADGRL4Q9HBW9 690 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 EMC7Q9NPA0 242 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 POLE4Q9NR33 117 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 PLSCR4Q9NRQ2 329 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 INPP5EQ9NRR6 644 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 HAO2Q9NYQ3 351 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 UBAP1Q9NZ09 502 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 ASH2LQ9UBL3 628 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 PSORS1C1Q9UIG5 152 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 ERRFI1Q9UJM3 462 aaPredicted RBP5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 IKZF2Q9UKS7 526 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 EXOSC1Q9Y3B2 195 aaKnown RBP5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 ITPR1Q14643 2758 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 NCKAP5O14513 1909 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 MAGEA13PA6NCF6 341 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZNF878C9JN71 531 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZNF593O00488 134 aaPredicted RBP5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 DOK2O60496 412 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 EIF4EBP3O60516 100 aaPredicted RBP5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 C1QL1O75973 258 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 GPANK1O95872 356 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 WNT11O96014 354 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 KRT8P05787 483 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 LYNP07948 512 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 ITGA5P08648 1049 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 CST2P09228 141 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 SBK2P0C263 348 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 CD79AP11912 226 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 COX5AP20674 150 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 IGHV1-2P23083 117 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 COL8A1P27658 744 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 DCKP27707 260 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 HSD11B1P28845 292 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 NTF4P34130 210 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 CD79BP40259 229 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZNF133P52736 654 aaPredicted RBP5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 LSM6P62312 80 aaKnown RBP5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 PLP2Q04941 152 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 DBPQ10586 325 aaPredicted RBP5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 ST3GAL4Q11206 333 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 TAF13Q15543 124 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 MEP1BQ16820 701 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 TBRG1Q3YBR2 411 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 LINC01590Q5TEZ4 76 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZNF544Q6NX49 715 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 TMEM154Q6P9G4 183 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 KCTD18Q6PI47 426 aaPredicted RBP5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 LRFN4Q6PJG9 635 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 UGT2A3Q6UWM9 527 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 B3GLCTQ6Y288 498 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 TMPRSS11AQ6ZMR5 421 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 FOXL2NBQ6ZUU3 175 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 BHLHA15Q7RTS1 189 aaPredicted RBP5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 DPY19L4Q7Z388 723 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 KRT77Q7Z794 578 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 LINC00346Q8IVM7 164 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 DMRTC2Q8IXT2 367 aaPredicted RBP5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 TIGD4Q8IY51 512 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 CCDC36Q8IYA8 594 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC22A24Q8N4F4 322 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 ACBD7Q8N6N7 88 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZNF610Q8N9Z0 462 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 RELL2Q8NC24 303 aaPredicted RBP5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 STEAP2Q8NFT2 490 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 OR4F15Q8NGB8 312 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 OR52I1Q8NGK6 324 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 THEM6Q8WUY1 208 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 SNX33Q8WV41 574 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 ASB17Q8WXJ9 295 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 HTRA1Q92743 480 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 PTP4A1Q93096 173 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 TMEM80Q96HE8 168 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZNF416Q9BWM5 594 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 MND1Q9BWT6 205 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 HDHD5Q9BXW7 423 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 TTTY10Q9BZA0 68 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 YIPF3Q9GZM5 350 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 MOV10Q9HCE1 1003 aaKnown RBP5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 OBP2BQ9NPH6 170 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 KCNJ16Q9NPI9 418 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 PLCXD1Q9NUJ7 323 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 ELOVL5Q9NYP7 299 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 PLEK2Q9NYT0 353 aa5.78□□□□□ -1.48
CTDNEP1-204ENST00000570484 FBXL3Q9UKT7 428 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms