RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 SCG5P05408 212 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 DAP3P51398 398 aaKnown RBP10.15□□□□□ -0.78
CAPN3-220ENST00000569827 TAS2R41P59536 307 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 SLC3A1Q07837 685 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 PSG7Q13046 419 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 MOGQ16653 247 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 MTX3Q5HYI7 312 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 SLC25A47Q6Q0C1 308 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 Q6ZR03 302 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 SPATC1Q76KD6 591 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 OR2Z1Q8NG97 314 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 OR10A6Q8NH74 314 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 SLC26A7Q8TE54 656 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 SLC7A6Q92536 515 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 TLCD1Q96CP7 247 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 SGTBQ96EQ0 304 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 SIGLEC11Q96RL6 698 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 MS4A7Q9GZW8 240 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-220ENST00000569827 PATZ1Q9HBE1 687 aaKnown RBP10.15□□□□□ -0.78
CAPN3-220ENST00000569827 EMC7Q9NPA0 242 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 SH3GLB1Q9Y371 365 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 GMEB1Q9Y692 573 aa10.15□□□□□ -0.78
CAPN3-220ENST00000569827 TRAV40A0A0B4J280 105 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 MT-ND1P03886 318 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 RNASE1P07998 156 aaKnown RBP10.14□□□□□ -0.79
CAPN3-220ENST00000569827 THRBP10828 461 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 CD80P33681 288 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 OR1E2P47887 323 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 ZNF133P52736 654 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-220ENST00000569827 BTG1P62324 171 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 PIN1Q13526 163 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-220ENST00000569827 NRN1LQ496H8 165 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 C1orf94Q6P1W5 598 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 OR5AS1Q8N127 324 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 PARP8Q8N3A8 854 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 KLHL36Q8N4N3 616 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 ZNF420Q8TAQ5 688 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-220ENST00000569827 MPP4Q96JB8 637 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 CGREF1Q99674 301 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 CCDC28BQ9BUN5 200 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 MRI1Q9BV20 369 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 KLHL21Q9UJP4 597 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 RAB21Q9UL25 225 aa10.14□□□□□ -0.79
CAPN3-220ENST00000569827 TRAV27A0A087WT01 109 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 CEACAM18A8MTB9 384 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 F5H0A9 414 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-220ENST00000569827 ERLIN1O75477 346 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 ABHD16AO95870 558 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 CYB5R3P00387 301 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-220ENST00000569827 CD55P08174 381 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 ADH4P08319 380 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 SELEP16581 610 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 SLC6A9P48067 706 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 PRSS12P56730 875 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 HOXA4Q00056 320 aaPredicted RBP10.13□□□□□ -0.79
CAPN3-220ENST00000569827 CDK5R2Q13319 367 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 NFYCQ13952 458 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 ENDOGQ14249 297 aaKnown RBP10.13□□□□□ -0.79
CAPN3-220ENST00000569827 FAM201AQ5SY85 155 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 BRD3OSQ6XYD6 125 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 SPICQ8N5J4 248 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 OR10AD1Q8NGE0 317 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 TMEM239Q8WW34 195 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 SLC25A28Q96A46 364 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 CMBLQ96DG6 245 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 C4orf45Q96LM5 186 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 C7orf26Q96N11 449 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 OR2V2Q96R30 315 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 DIRC2Q96SL1 478 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 SLC19A3Q9BZV2 496 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 PCDHAC1Q9H158 963 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 KAT8Q9H7Z6 458 aaKnown RBP10.13□□□□□ -0.79
CAPN3-220ENST00000569827 EVA1AQ9H8M9 152 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 TMBIM4Q9HC24 238 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 ZDHHC8Q9ULC8 765 aa10.13□□□□□ -0.79
CAPN3-220ENST00000569827 PPIAL4EA0A075B759 164 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 PPIAL4CA0A0B4J2A2 164 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 PPIAL4DF5H284 164 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 ANGPT2O15123 496 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 HOXA3O43365 443 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-220ENST00000569827 TGDSO95455 350 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 CST2P09228 141 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 PPIAL4FP0DN26 164 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 HTR5AP47898 357 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 SLC18A1P54219 525 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 IL13RA1P78552 427 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 HLXQ14774 488 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-220ENST00000569827 ESCO2Q56NI9 601 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 ALG10Q5BKT4 473 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 FAM27BQ5VT28 67 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 CROCCP2Q86T23 111 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 PATL1Q86TB9 770 aaKnown RBP10.12□□□□□ -0.79
CAPN3-220ENST00000569827 LRRC28Q86X40 367 aaPredicted RBP10.12□□□□□ -0.79
CAPN3-220ENST00000569827 KIR3DL3Q8N743 410 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 ZNF283Q8N7M2 679 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 C19orf18Q8NEA5 215 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 OR52E2Q8NGJ4 325 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 LRRC8CQ8TDW0 803 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 TMIGD2Q96BF3 282 aa10.12□□□□□ -0.79
CAPN3-220ENST00000569827 GPA33Q99795 319 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms