RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 PPBPP02775 128 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 UBE2KP61086 200 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 LYPLAL1Q5VWZ2 237 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 TMPPEQ6ZT21 453 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 ACOT7LQ6ZUV0 252 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 CD163Q86VB7 1156 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 C2orf73Q8N5S3 287 aaPredicted RBP9.85□□□□□ -0.83
CLK3-226ENST00000569406 OR8J1Q8NGP2 316 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 INTS14Q96SY0 518 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 SLC25A31Q9H0C2 315 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 ALPK3Q96L96 1907 aa9.85□□□□□ -0.83
CLK3-226ENST00000569406 HIDE1A8MVS5 230 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 GEMIN2O14893 280 aaKnown RBP9.84□□□□□ -0.83
CLK3-226ENST00000569406 SPINT1O43278 529 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 RDH16O75452 317 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 PDYNP01213 254 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 LRG1P02750 347 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 IL5P05113 134 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 TRGC1P0CF51 173 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 DCTDP32321 178 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 CASRP41180 1078 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 SELENOTP62341 195 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 CHIT1Q13231 466 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 RHEBQ15382 184 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 RNLSQ5VYX0 342 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 ZNF343Q6P1L6 599 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 MTSS1LQ765P7 747 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 OR4C5Q8NGB2 326 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 RNF208Q9H0X6 261 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 CBLCQ9ULV8 474 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 A0A1W2PPK0 400 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 NPC1O15118 1278 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 SCN2BO60939 215 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 CHRM4P08173 479 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 SPINT3P49223 89 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 LRRC56Q8IYG6 542 aaPredicted RBP9.84□□□□□ -0.83
CLK3-226ENST00000569406 SMIM4Q8WVI0 70 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 MRGPRX1Q96LB2 322 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 NMNAT1Q9HAN9 279 aaPredicted RBP9.84□□□□□ -0.83
CLK3-226ENST00000569406 IL36AQ9UHA7 158 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 TMEM272A0A1B0GTI8 110 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 ZNF727A8MUV8 499 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 KCNK5O95279 499 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 SCGB1D1O95968 90 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 CKMP06732 381 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 PRPH2P23942 346 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 ID4P47928 161 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 GIPRP48546 466 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 RIPPLY3P57055 190 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 ARHGAP11BQ3KRB8 267 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 MOGAT2Q3SYC2 334 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 CD200R1LQ6Q8B3 271 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 HSD11B1LQ7Z5J1 315 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 SLC35E3Q7Z769 313 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 OR4K1Q8NGD4 311 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 ZNF596Q8TC21 504 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 PPCDCQ96CD2 204 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 FAM46AQ96IP4 442 aaKnown RBP9.84□□□□□ -0.83
CLK3-226ENST00000569406 ZNF649Q9BS31 505 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 SLC12A9Q9BXP2 914 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 OR2J1Q9GZK6 312 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 B4GALT6Q9UBX8 382 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 TNFSF18Q9UNG2 199 aa9.84□□□□□ -0.83
CLK3-226ENST00000569406 EXOSC1Q9Y3B2 195 aaKnown RBP9.84□□□□□ -0.83
CLK3-226ENST00000569406 OR2AG2A6NM03 316 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 SEMG1P04279 462 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 NSG1P42857 185 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 CCR5P51681 352 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 CRYBA2P53672 197 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 PFN3P60673 137 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 SNRPGP62308 76 aaKnown RBP9.83□□□□□ -0.84
CLK3-226ENST00000569406 SRSF11Q05519 484 aaKnown RBP9.83□□□□□ -0.84
CLK3-226ENST00000569406 PCGF3Q3KNV8 242 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 COL5A1-AS1Q5SY13 56 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 ADNP2Q6IQ32 1131 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 EIF5AL1Q6IS14 154 aaKnown RBP9.83□□□□□ -0.84
CLK3-226ENST00000569406 FAM83HQ6ZRV2 1179 aaPredicted RBP9.83□□□□□ -0.84
CLK3-226ENST00000569406 Q6ZVU0 165 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 HMGN2P46Q86SG4 172 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 SYT9Q86SS6 491 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 CPOQ8IVL8 374 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 LILRA3Q8N6C8 439 aaPredicted RBP9.83□□□□□ -0.84
CLK3-226ENST00000569406 ARIH2OSQ8N7S6 290 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 DOHHQ9BU89 302 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 HIPK2Q9H2X6 1198 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 ZDHHC3Q9NYG2 299 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 PPIAL4AQ9Y536 164 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 A0A087WUJ7 227 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 TMEM229AB2RXF0 380 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 UMAD1C9J7I0 102 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 K7EP13 123 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 OR1F1O43749 312 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 SCGB1D2O95969 90 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 IL6RP08887 468 aaPredicted RBP9.83□□□□□ -0.84
CLK3-226ENST00000569406 ACRP10323 421 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 DCAF7P61962 342 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 OLFML2AQ68BL7 652 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 ZNF836Q6ZNA1 936 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 TMED4Q7Z7H5 227 aa9.83□□□□□ -0.84
CLK3-226ENST00000569406 GABRG1Q8N1C3 465 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms