RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 DLEU7Q6UYE1 221 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 SYT9Q86SS6 491 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 SLC26A7Q8TE54 656 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 GEMIN6Q8WXD5 167 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 NMD3Q96D46 503 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 C4orf45Q96LM5 186 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 C1orf147Q96MC9 270 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 ALG12Q9BV10 488 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 PARD6BQ9BYG5 372 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 NPHS2Q9NP85 383 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 MEPEQ9NQ76 525 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 EGFL7Q9UHF1 273 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 NDRG4Q9ULP0 352 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 LRCH1Q9Y2L9 728 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 UGT2A1Q9Y4X1 527 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 TIMM10BQ9Y5J6 103 aa13.28□□□□□ -0.28
HERPUD1-215ENST00000568676 HTR3EA5X5Y0 456 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 F5H0A9 414 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 TIMM8AO60220 97 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 OR7A10O76100 309 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 SLC2A10O95528 541 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 OPN1SWP03999 348 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 CDAP32320 146 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 CD47Q08722 323 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 SGCAQ16586 387 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 TMEM255AQ5JRV8 349 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 ZNF362Q5T0B9 420 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 LEG1Q6P5S2 330 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 RFPL4BQ6ZWI9 263 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 ZNF771Q7L3S4 317 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 AKR7LQ8NHP1 331 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 VANGL1Q8TAA9 524 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 THOC1Q96FV9 657 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 COG8Q96MW5 612 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 DUX5Q96PT3 197 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 RBP7Q96R05 134 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 DCLRE1CQ96SD1 692 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 PRSS27Q9BQR3 290 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 OR2H1Q9GZK4 316 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 NANOGQ9H9S0 305 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 IL19Q9UHD0 177 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 TRRAPQ9Y4A5 3859 aa13.27□□□□□ -0.29
HERPUD1-215ENST00000568676 COX5BP10606 129 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 PCGF2P35227 344 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 MDH2P40926 338 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 AQP2P41181 271 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 IDH3AP50213 366 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 ERVK-25P63136 954 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 PAX8Q06710 450 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 SLC9A3R2Q15599 337 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 MIDNQ504T8 468 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 AGKQ53H12 422 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 FAM205BPQ63HN1 556 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 C16orf87Q6PH81 154 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 BTNL3Q6UXE8 466 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 LRRN1Q6UXK5 716 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 RBM45Q8IUH3 476 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 DPP10Q8N608 796 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 OR4D11Q8NGI4 311 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 OR52E2Q8NGJ4 325 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 SGTBQ96EQ0 304 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 MAGEB18Q96M61 343 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 ZNF48Q96MX3 618 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 TXNIPQ9H3M7 391 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 MSL2Q9HCI7 577 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 TBCCD1Q9NVR7 557 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 RAB21Q9UL25 225 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 PPP1R3CQ9UQK1 317 aa13.26□□□□□ -0.29
HERPUD1-215ENST00000568676 C12orf71A8MTZ7 269 aa13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 NGFP01138 241 aa13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 THRBP10828 461 aa13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 KITLGP21583 273 aa13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 BPIFB3P59826 476 aa13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 MAGOHP61326 146 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 PSG7Q13046 419 aa13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 SLC25A47Q6Q0C1 308 aa13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 FOXL2NBQ6ZUU3 175 aa13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 DHDDSQ86SQ9 333 aa13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 BCL6BQ8N143 479 aaPredicted RBP13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 PARP8Q8N3A8 854 aa13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 NSMAFQ92636 917 aa13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 HDAC2Q92769 488 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 TMIGD2Q96BF3 282 aa13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 CGREF1Q99674 301 aa13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 WNT5BQ9H1J7 359 aa13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 KAT8Q9H7Z6 458 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 NDUFAF1Q9Y375 327 aa13.25□□□□□ -0.29
HERPUD1-215ENST00000568676 OR5F1O95221 314 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 FSTL3O95633 263 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 ABHD16AO95870 558 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 PLATP00750 562 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 LAP3P28838 519 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 ZMYND11Q15326 602 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 ALG10Q5BKT4 473 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 SLC27A4Q6P1M0 643 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 CCDC80Q76M96 950 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 TSPYL5Q86VY4 417 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 OR2Z1Q8NG97 314 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 TSPEARQ8WU66 669 aa13.24□□□□□ -0.29
HERPUD1-215ENST00000568676 TMEM239Q8WW34 195 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms