RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 PINX1Q96BK5 328 aaKnown RBP2.53□□□□□ -2
HERPUD1-212ENST00000567944 CCDC127Q96BQ5 260 aa2.53□□□□□ -2
HERPUD1-212ENST00000567944 FGGYQ96C11 551 aa2.53□□□□□ -2
HERPUD1-212ENST00000567944 OTUB2Q96DC9 234 aa2.53□□□□□ -2
HERPUD1-212ENST00000567944 CELF6Q96J87 481 aaKnown RBP2.53□□□□□ -2
HERPUD1-212ENST00000567944 PANX2Q96RD6 677 aa2.53□□□□□ -2
HERPUD1-212ENST00000567944 ZBTB18Q99592 522 aa2.53□□□□□ -2
HERPUD1-212ENST00000567944 TCEAL7Q9BRU2 100 aa2.53□□□□□ -2
HERPUD1-212ENST00000567944 LHX5Q9H2C1 402 aa2.53□□□□□ -2
HERPUD1-212ENST00000567944 GLIPR2Q9H4G4 154 aa2.53□□□□□ -2
HERPUD1-212ENST00000567944 DHX33Q9H6R0 707 aaKnown RBP2.53□□□□□ -2
HERPUD1-212ENST00000567944 CMTM6Q9NX76 183 aa2.53□□□□□ -2
HERPUD1-212ENST00000567944 RBAKQ9NYW8 714 aaPredicted RBP2.53□□□□□ -2
HERPUD1-212ENST00000567944 UVRAGQ9P2Y5 699 aa2.53□□□□□ -2
HERPUD1-212ENST00000567944 GLS2Q9UI32 602 aa2.53□□□□□ -2
HERPUD1-212ENST00000567944 GINS2Q9Y248 185 aa2.53□□□□□ -2
HERPUD1-212ENST00000567944 MRPS7Q9Y2R9 242 aaKnown RBP2.53□□□□□ -2
HERPUD1-212ENST00000567944 HYOU1Q9Y4L1 999 aa2.53□□□□□ -2
HERPUD1-212ENST00000567944 CACNA1GO43497 2377 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 FRMPD3Q5JV73 1810 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 ARAP2Q8WZ64 1704 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 IGHV7-81A0A0B4J1V7 117 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 A0A0J9YYE9 177 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 A0A1W2PRG6 482 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 ARHGEF35A5YM69 484 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 CCDC160A6NGH7 325 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 PP2D1A8MPX8 630 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 KPNA4O00629 521 aaPredicted RBP2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 DNALI1O14645 258 aaPredicted RBP2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 CLDN3O15551 220 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 MTX2O75431 263 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 CCNKO75909 580 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 DCTN3O75935 186 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 CIAO1O76071 339 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 SEMA3DO95025 777 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 TGM6O95932 706 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 LGI1O95970 557 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 F10P00742 488 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 TRBC1P01850 177 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 SERPINA5P05154 406 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 MLNP12872 115 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 TNNI1P19237 187 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 MDKP21741 143 aaPredicted RBP2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 WARSP23381 471 aaKnown RBP2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 S100PP25815 95 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 PSMA5P28066 241 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 SERPINB1P30740 379 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 CCR1P32246 355 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 RCVRNP35243 200 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 OR1G1P47890 313 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 SERPINB9P50453 376 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 CAV2P51636 162 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 CDH4P55283 916 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 RPL26P61254 145 aaKnown RBP2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 AP1S1P61966 158 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 NTHL1P78549 312 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 CDH17Q12864 832 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 PDZK1IP1Q13113 114 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 CHIT1Q13231 466 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 ATXN7L3Q14CW9 347 aaPredicted RBP2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 ASPHD2Q6ICH7 369 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 CBLN3Q6UW01 205 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 LRRC70Q7Z2Q7 622 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 PEX26Q7Z412 305 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 LUZP2Q86TE4 346 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 FAM228AQ86W67 206 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 SLC13A5Q86YT5 568 aaPredicted RBP2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 TRAM1L1Q8N609 369 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 BHLHE23Q8NDY6 225 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 LRRC20Q8TCA0 184 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 CD300LFQ8TDQ1 290 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 IL1F10Q8WWZ1 152 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 TCEAL3Q969E4 200 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 MARC2Q969Z3 335 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 S100PBPQ96BU1 408 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 DGCR14Q96DF8 476 aaKnown RBP2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 TCEAL4Q96EI5 215 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 HPDLQ96IR7 371 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 CAPZA3Q96KX2 299 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 TCEANC2Q96MN5 208 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 XPO6Q96QU8 1125 aaKnown RBP2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 CYP2S1Q96SQ9 504 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 TMEM175Q9BSA9 504 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 NICN1Q9BSH3 213 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 TPPP3Q9BW30 176 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 SPATA16Q9BXB7 569 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 BBS2Q9BXC9 721 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 FRMD8P1Q9BZ68 369 aaPredicted RBP2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 MRPL37Q9BZE1 423 aaKnown RBP2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 ZYG11BQ9C0D3 744 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 PTGES2Q9H7Z7 377 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 CTPS2Q9NRF8 586 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 INIPQ9NRY2 104 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 MARCH5Q9NX47 278 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 HYPKQ9NX55 129 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 B3GNT2Q9NY97 397 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 WARS2Q9UGM6 360 aaKnown RBP2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 RSL24D1Q9UHA3 163 aaKnown RBP2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 STAP1Q9ULZ2 295 aa2.52□□□□□ -2.01
HERPUD1-212ENST00000567944 PSMD13Q9UNM6 376 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms