RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	C11orf98	E9PRG8	122 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	PLPP3	O14495	311 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	C1QC	P02747	245 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	QDPR	P09417	244 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	NPY4R	P50391	375 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	ZNF84	P51523	738 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	COX10	Q12887	443 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	PSG7	Q13046	419 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	MAD2L1	Q13257	205 aa	Predicted RBP	11.36	□□□□□ -0.59
SMG1-213	ENST00000567737		Q6ZR03	302 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	DCDC5	Q6ZRR9	648 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	PDZD9	Q8IXQ8	264 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	C10orf53	Q8N6V4	93 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	PNLDC1	Q8NA58	520 aa	Known RBP	11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	OR2T6	Q8NHC8	308 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	AGR3	Q8TD06	166 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	TUBGCP3	Q96CW5	907 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	C3orf30	Q96M34	536 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	TSPYL1	Q9H0U9	437 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	ELOVL3	Q9HB03	270 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	CALML5	Q9NZT1	146 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	P2RX2	Q9UBL9	471 aa		11.36	□□□□□ -0.59
SMG1-213	ENST00000567737	LOC100509620	A0A075B734	347 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	LRRC30	A6NM36	301 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	PLIN3	O60664	434 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	FBXO24	O75426	580 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	OR6A2	O95222	327 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	FSTL3	O95633	263 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	BGLAP	P02818	100 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	NHLRC4	P0CG21	123 aa	Predicted RBP	11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	ADORA3	P0DMS8	318 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	VSIG10L2	P0DP72	767 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	GSTM3	P21266	225 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	SLC6A2	P23975	617 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	GCA	P28676	217 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	MSX2	P35548	267 aa	Predicted RBP	11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	ETV4	P43268	484 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	KIR2DS4	P43632	304 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	CRISP3	P54108	245 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	ALG10B	Q5I7T1	473 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	ZBTB37	Q5TC79	503 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	LYPD2	Q6UXB3	125 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	SLC35D2	Q76EJ3	337 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	NDUFA11	Q86Y39	141 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	C1orf87	Q8N0U7	546 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	CNPY4	Q8N129	248 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	TRIML2	Q8N7C3	387 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	OR4C13	Q8NGP0	309 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	OR5R1	Q8NH85	324 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	SLC25A44	Q96H78	314 aa	Predicted RBP	11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	SIRPD	Q9H106	197 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	CHST2	Q9Y4C5	530 aa		11.35	□□□□□ -0.59
SMG1-213	ENST00000567737	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	CHRNG	P07510	517 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	ZNF32	P17041	273 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	DCTN2	Q13561	401 aa	Known RBP	11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	MELK	Q14680	651 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	CASP8	Q14790	479 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	MAPK11	Q15759	364 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	CASC10	Q5T4H9	136 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	ARL9	Q6T311	187 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	ZNF841	Q6ZN19	808 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	C10orf107	Q8IVU9	208 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	ATG16L2	Q8NAA4	619 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	AKR7L	Q8NHP1	331 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	SLC35B4	Q969S0	331 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	C4orf45	Q96LM5	186 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	MOGAT1	Q96PD6	335 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	CITED4	Q96RK1	184 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	IFT52	Q9Y366	437 aa		11.34	□□□□□ -0.59
SMG1-213	ENST00000567737	LCE6A	A0A183	80 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737		A0A1B0GWA3	101 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	F13B	P05160	661 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	BCHE	P06276	602 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	PGA4	P0DJD7	388 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	PGA3	P0DJD8	388 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	CCT5	P48643	541 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	CLRN1	P58418	232 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	KRTAP10-11	P60412	298 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	EMX2	Q04743	252 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	LSMEM1	Q8N8F7	131 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	NPEPL1	Q8NDH3	523 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	WFDC9	Q8NEX5	89 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	OR5J2	Q8NH18	312 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	MCHR2	Q969V1	340 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	CLPTM1L	Q96KA5	538 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	ZNF607	Q96SK3	696 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	SEMA6A	Q9H2E6	1030 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	CNTD2	Q9H8S5	307 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	MKS1	Q9NXB0	559 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	SELENON	Q9NZV5	590 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	ERVK-18	Q9QC07	812 aa		11.33	□□□□□ -0.6
SMG1-213	ENST00000567737	CCDC154	A6NI56	674 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	TRIM13	O60858	407 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	PAH	P00439	452 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	IGHG1	P01857	330 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	KITLG	P21583	273 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	SRP9	P49458	86 aa	Known RBP	11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms