RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	NKPD1	Q17RQ9	610 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF718	Q3SXZ3	478 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	SPATS1	Q496A3	300 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	FGD3	Q5JSP0	725 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	SAMD4B	Q5PRF9	694 aa	Known RBP	5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	GPR139	Q6DWJ6	353 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	UNQ6126/PRO20091	Q6UXV3	157 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	FOXL2NB	Q6ZUU3	175 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	ASRGL1	Q7L266	308 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	C1orf174	Q8IYL3	243 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	PGAM4	Q8N0Y7	254 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	FAM86B1	Q8N7N1	296 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	CLDN22	Q8N7P3	220 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	OR52J3	Q8NH60	311 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	RDH5	Q92781	318 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	MSI2	Q96DH6	328 aa	Known RBP	5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	PYURF	Q96I23	114 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	FAM46A	Q96IP4	442 aa	Known RBP	5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	POM121L2	Q96KW2	1035 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635		Q96M85	177 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	TSPAN32	Q96QS1	320 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	WAC	Q9BTA9	647 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	BEX2	Q9BXY8	128 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	BPESC1	Q9GZL8	116 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	WNT5B	Q9H1J7	359 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	OR51B6	Q9H340	312 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	TPK1	Q9H3S4	243 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	KRCC1	Q9NPI7	259 aa	Predicted RBP	5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	HINT3	Q9NQE9	182 aa	Known RBP	5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	SLCO1C1	Q9NYB5	712 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	TAAR3P	Q9P1P4	343 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	CD300A	Q9UGN4	299 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	MAGEL2	Q9UJ55	1249 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	CDC42EP3	Q9UKI2	254 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	AURKC	Q9UQB9	309 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	SIGLEC7	Q9Y286	467 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	ADAM18	Q9Y3Q7	739 aa		5.93	□□□□□ -1.46
SF3B3-209	ENST00000567635	MXRA5	Q9NR99	2828 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	IGLV3-9	A0A075B6K5	115 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	TRBV4-1	A0A0J9YWV2	114 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635		A0A1W2PPL8	197 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	PRSS37	A4D1T9	235 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	LRP5L	A4QPB2	252 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	C17orf100	A8MU93	164 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	LILRA1	O75019	489 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	DIRAS1	O95057	198 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	NDUFB2	O95178	105 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	GADD45G	O95257	159 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	HPX	P02790	462 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	MT-ND5	P03915	603 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	NAT2	P11245	290 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	MSR1	P21757	451 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	MSX2	P35548	267 aa	Predicted RBP	5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	OMP	P47874	163 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	LIMS1	P48059	325 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	TMEM33	P57088	247 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	ERVS71-1	P61550	626 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	MRPS11	P82912	194 aa	Known RBP	5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	MXRA7	P84157	204 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	ENDOG	Q14249	297 aa	Known RBP	5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	SEC23B	Q15437	767 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	PCGF3	Q3KNV8	242 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	ALKBH6	Q3KRA9	238 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	ELFN2	Q5R3F8	820 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	FAM166A	Q6J272	317 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF774	Q6NX45	483 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	TMEM154	Q6P9G4	183 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	ARL9	Q6T311	187 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	UGT2A3	Q6UWM9	527 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	C16orf89	Q6UX73	402 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	DPY19L2P2	Q6ZN68	376 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	FAM122B	Q7Z309	247 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	SYT9	Q86SS6	491 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	DEFB107A	Q8IZN7	70 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	ICA1L	Q8NDH6	482 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	OR1J1	Q8NGS3	322 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	AKR7L	Q8NHP1	331 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	SNX33	Q8WV41	574 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	HPS1	Q92902	700 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	MCUR1	Q96AQ8	359 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	DHRS1	Q96LJ7	313 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	NSMCE2	Q96MF7	247 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF570	Q96NI8	536 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	MDFI	Q99750	246 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	FUZ	Q9BT04	418 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF416	Q9BWM5	594 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	OR2H1	Q9GZK4	316 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	SHARPIN	Q9H0F6	387 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	CHODL	Q9H9P2	273 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	ELOVL3	Q9HB03	270 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	NRIP3	Q9NQ35	241 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	POLE4	Q9NR33	117 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	NDE1	Q9NXR1	346 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	NKIRAS2	Q9NYR9	191 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	LPAR3	Q9UBY5	353 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	IER3IP1	Q9Y5U9	82 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	TANC2	Q9HCD6	1990 aa		5.92	□□□□□ -1.46
SF3B3-209	ENST00000567635	FBN3	Q75N90	2809 aa		5.91	□□□□□ -1.46
SF3B3-209	ENST00000567635		B2RBV5	119 aa		5.91	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms