RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 PPIAL4EA0A075B759 164 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 PPIAL4CA0A0B4J2A2 164 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 C12orf71A8MTZ7 269 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 FAM220BPB1ANY3 271 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 PPIAL4DF5H284 164 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 AHCYL1O43865 530 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 PPIAL4FP0DN26 164 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 TROVE2P10155 538 aaKnown RBP eCLIP12.72□□□□□ -0.37
RNF40-209ENST00000566703 COX5BP10606 129 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 MPV17P39210 176 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 ERVK-25P63136 954 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 FMODQ06828 376 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 DCAF12L2Q5VW00 463 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 THSD4Q6ZMP0 1018 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 OR2T12Q8NG77 320 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 IPCEF1Q8WWN9 437 aaPredicted RBP12.72□□□□□ -0.37
RNF40-209ENST00000566703 LZICQ8WZA0 190 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 GTF3AQ92664 365 aaKnown RBP12.72□□□□□ -0.37
RNF40-209ENST00000566703 C4orf45Q96LM5 186 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 SUCNR1Q9BXA5 334 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 SAR1AQ9NR31 198 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 NDRG4Q9ULP0 352 aaKnown RBP12.72□□□□□ -0.37
RNF40-209ENST00000566703 CACNG2Q9Y698 323 aa12.72□□□□□ -0.37
RNF40-209ENST00000566703 LOC105371242A0A075B767 164 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 LOC100653049A0A140TA62 436 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 ELOVL7A1L3X0 281 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 ZSCAN5BA6NJL1 495 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 KRT34O76011 436 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 MAKP20794 623 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 MSR1P21757 451 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 SLC9A3P48764 834 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 GLO1Q04760 184 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 PRKCDQ05655 676 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 TOP3AQ13472 1001 aaPredicted RBP12.71□□□□□ -0.37
RNF40-209ENST00000566703 TRAM2Q15035 370 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 LRRC23Q53EV4 343 aaPredicted RBP12.71□□□□□ -0.37
RNF40-209ENST00000566703 SPATA46Q5T0L3 261 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 MICU2Q8IYU8 434 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 OFCC1Q8IZS5 231 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 FAM156AQ8NDB6 213 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 ABHD4Q8TB40 342 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 GCDHQ92947 438 aaPredicted RBP12.71□□□□□ -0.37
RNF40-209ENST00000566703 TPD52L3Q96J77 140 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 GAL3ST1Q99999 423 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 TBCCD1Q9NVR7 557 aa12.71□□□□□ -0.37
RNF40-209ENST00000566703 SLC22A2O15244 555 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 PIP5K1CO60331 668 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 FOXH1O75593 365 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 NGFP01138 241 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 IFNW1P05000 195 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 FPR2P25090 351 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 ACTG1P63261 375 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 CDK5R2Q13319 367 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 FHL1Q13642 323 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 ENDOGQ14249 297 aaKnown RBP12.7□□□□□ -0.38
RNF40-209ENST00000566703 MTX3Q5HYI7 312 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 TMEM255AQ5JRV8 349 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 RFPL4BQ6ZWI9 263 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 ARPINQ7Z6K5 226 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 OAFQ86UD1 273 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 NPEPL1Q8NDH3 523 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 OR51A7Q8NH64 312 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 ST7LQ8TDW4 575 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 ZMYND19Q96E35 227 aaPredicted RBP12.7□□□□□ -0.38
RNF40-209ENST00000566703 FNDC11Q9BVV2 318 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 C7orf69Q9H7B7 122 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 POLE4Q9NR33 117 aa12.7□□□□□ -0.38
RNF40-209ENST00000566703 ARGLU1Q9NWB6 273 aaPredicted RBP12.7□□□□□ -0.38
RNF40-209ENST00000566703 EFCAB9A8MZ26 197 aa12.69□□□□□ -0.38
RNF40-209ENST00000566703 GSTM3P21266 225 aa12.69□□□□□ -0.38
RNF40-209ENST00000566703 TNFAIP6P98066 277 aaPredicted RBP12.69□□□□□ -0.38
RNF40-209ENST00000566703 PSG7Q13046 419 aa12.69□□□□□ -0.38
RNF40-209ENST00000566703 ZNF774Q6NX45 483 aa12.69□□□□□ -0.38
RNF40-209ENST00000566703 TMPRSS11FQ6ZWK6 438 aa12.69□□□□□ -0.38
RNF40-209ENST00000566703 NRMQ8IXM6 262 aa12.69□□□□□ -0.38
RNF40-209ENST00000566703 ACOT11Q8WXI4 607 aaPredicted RBP12.69□□□□□ -0.38
RNF40-209ENST00000566703 SAMD8Q96LT4 415 aa12.69□□□□□ -0.38
RNF40-209ENST00000566703 COG8Q96MW5 612 aa12.69□□□□□ -0.38
RNF40-209ENST00000566703 PLA2G12AQ9BZM1 189 aa12.69□□□□□ -0.38
RNF40-209ENST00000566703 NTN4Q9HB63 628 aa12.69□□□□□ -0.38
RNF40-209ENST00000566703 MAN2C1Q9NTJ4 1040 aa12.69□□□□□ -0.38
RNF40-209ENST00000566703 POLR3KQ9Y2Y1 108 aaPredicted RBP12.69□□□□□ -0.38
RNF40-209ENST00000566703 NPTNQ9Y639 398 aa12.69□□□□□ -0.38
RNF40-209ENST00000566703 A0A087WUU8 490 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 A0A1W2PPL8 197 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 TIMM8AO60220 97 aaPredicted RBP12.68□□□□□ -0.38
RNF40-209ENST00000566703 ABHD16AO95870 558 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 FSHBP01225 129 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 CD14P08571 375 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 ADRA2CP18825 462 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 TNFRSF1AP19438 455 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 KITLGP21583 273 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 TNFSF4P23510 183 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 SCRN3Q0VDG4 424 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 MBOAT2Q6ZWT7 520 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 IGFN1Q86VF2 1251 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 CLDN22Q8N7P3 220 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 C3orf56Q8N813 242 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 SGMS2Q8NHU3 365 aa12.68□□□□□ -0.38
RNF40-209ENST00000566703 GEMIN6Q8WXD5 167 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms