RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 PRDM7Q9NQW5 492 aa11.49□□□□□ -0.57
COMMD4-209ENST00000564068 MIA3Q5JRA6 1907 aa11.49□□□□□ -0.57
COMMD4-209ENST00000564068 SIPA1L1O43166 1804 aa11.49□□□□□ -0.57
COMMD4-209ENST00000564068 PRSS38A1L453 326 aa11.49□□□□□ -0.57
COMMD4-209ENST00000564068 PRRT4C9JH25 899 aa11.49□□□□□ -0.57
COMMD4-209ENST00000564068 KLF8O95600 359 aaPredicted RBP11.49□□□□□ -0.57
COMMD4-209ENST00000564068 HRH1P35367 487 aa11.49□□□□□ -0.57
COMMD4-209ENST00000564068 LIMS1P48059 325 aa11.49□□□□□ -0.57
COMMD4-209ENST00000564068 OR52W1Q6IF63 320 aa11.49□□□□□ -0.57
COMMD4-209ENST00000564068 SLC30A7Q8NEW0 376 aa11.49□□□□□ -0.57
COMMD4-209ENST00000564068 OR4D6Q8NGJ1 314 aa11.49□□□□□ -0.57
COMMD4-209ENST00000564068 SYT3Q9BQG1 590 aa11.49□□□□□ -0.57
COMMD4-209ENST00000564068 ENKD1Q9H0I2 346 aa11.49□□□□□ -0.57
COMMD4-209ENST00000564068 ZNF346Q9UL40 294 aaKnown RBP11.49□□□□□ -0.57
COMMD4-209ENST00000564068 F12P00748 615 aaPredicted RBP11.48□□□□□ -0.57
COMMD4-209ENST00000564068 ENPP1P22413 925 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 PRSS53Q2L4Q9 553 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 TMEM31Q5JXX7 168 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 AKR1E2Q96JD6 320 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 SCN3AQ9NY46 2000 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 DSPPQ9NZW4 1301 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 SPTBN2O15020 2390 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 OR2W5A6NFC9 320 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 BET1O15155 118 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 CDKN3Q16667 212 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 ADAMTSL4Q6UY14 1074 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 SHISA6Q6ZSJ9 500 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 TMPRSS11FQ6ZWK6 438 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 MRPL43Q8N983 215 aaKnown RBP11.48□□□□□ -0.57
COMMD4-209ENST00000564068 DAZLQ92904 295 aaKnown RBP11.48□□□□□ -0.57
COMMD4-209ENST00000564068 NRSN2Q9GZP1 204 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 EXOSC3Q9NQT5 275 aaKnown RBP11.48□□□□□ -0.57
COMMD4-209ENST00000564068 A0A087WV62 115 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 IMPA2O14732 288 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 OR2T1O43869 369 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 BLVRBP30043 206 aaPredicted RBP11.48□□□□□ -0.57
COMMD4-209ENST00000564068 ZNF93P35789 620 aaPredicted RBP11.48□□□□□ -0.57
COMMD4-209ENST00000564068 EMDP50402 254 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 ARF1P84077 181 aaKnown RBP11.48□□□□□ -0.57
COMMD4-209ENST00000564068 DOC2BQ14184 412 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 RSU1Q15404 277 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 BATFQ16520 125 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 EOGTQ5NDL2 527 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 C19orf48Q6RUI8 117 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 USP53Q70EK8 1073 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 MCATQ8IVS2 390 aaKnown RBP11.48□□□□□ -0.57
COMMD4-209ENST00000564068 OR11G2Q8NGC1 345 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 OR4N2Q8NGD1 307 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 WNT2BQ93097 391 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 LURAP1Q96LR2 239 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 OR5B12Q96R08 314 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 USB1Q9BQ65 265 aaKnown RBP11.48□□□□□ -0.57
COMMD4-209ENST00000564068 ZNF576Q9H609 170 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 PCDHGA5Q9Y5G8 931 aa11.48□□□□□ -0.57
COMMD4-209ENST00000564068 OR6C68A6NDL8 312 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 VSTM2BA6NLU5 285 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 CPN1P15169 458 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 ALOX5APP20292 161 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 ZNF547Q8IVP9 402 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 TDHQ8IZJ6 230 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 LMX1AQ8TE12 382 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 HIST1H2AAQ96QV6 131 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 CHST6Q9GZX3 395 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 MRPS18AQ9NVS2 196 aaKnown RBP11.47□□□□□ -0.57
COMMD4-209ENST00000564068 RAB22AQ9UL26 194 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 PPIL1Q9Y3C6 166 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 KPTNQ9Y664 436 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 GREB1LQ9C091 1923 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-209ENST00000564068 TMEM218A2RU14 115 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 PPP1R2P9O14990 202 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 TMIGD3P0DMS9 266 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-209ENST00000564068 NAGAP17050 411 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 SFTPDP35247 375 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 ZP2Q05996 745 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 FABP9Q0Z7S8 132 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 RUNX2Q13950 521 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 MRM1Q6IN84 353 aaKnown RBP11.47□□□□□ -0.57
COMMD4-209ENST00000564068 LSRQ86X29 649 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-209ENST00000564068 DEFB123Q8N688 67 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 OR14A16Q8NHC5 309 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 PDE7BQ9NP56 450 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 SLCO1C1Q9NYB5 712 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 MRPS28Q9Y2Q9 187 aaKnown RBP11.47□□□□□ -0.57
COMMD4-209ENST00000564068 FAM230AA0A1W2PPH8 454 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 LRP3O75074 770 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 IFNA10P01566 189 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 IFNA4P05014 189 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 HOXD4P09016 255 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-209ENST00000564068 C9orf50Q5SZB4 431 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 HIST2H3PS2Q5TEC6 136 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 CD200R1LQ6Q8B3 271 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 CORO6Q6QEF8 472 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 BEND4Q6ZU67 534 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 DCXRQ7Z4W1 244 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 STPG2Q8N412 459 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 GLYATL2Q8WU03 294 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 HSD17B8Q92506 261 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 UBL7Q96S82 380 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-209ENST00000564068 OR10A5Q9H207 317 aa11.47□□□□□ -0.57
COMMD4-209ENST00000564068 FGF22Q9HCT0 170 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms