RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 MUCL1Q96DR8 90 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 BORCS8Q96FH0 119 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 LIN37Q96GY3 246 aaPredicted RBP6.85□□□□□ -1.31
TCF4-216ENST00000562680 ZFP64Q9NPA5 681 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 B3GALT1Q9Y5Z6 326 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 V9GY05 133 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 RLN2P04090 185 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 CD3GP09693 182 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 RPS19P39019 145 aaKnown RBP6.85□□□□□ -1.31
TCF4-216ENST00000562680 SPCS3P61009 180 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 ZNF117Q03924 483 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 SF3A2Q15428 464 aaKnown RBP6.85□□□□□ -1.31
TCF4-216ENST00000562680 CEBPEQ15744 281 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 ZNF782Q6ZMW2 699 aaPredicted RBP6.85□□□□□ -1.31
TCF4-216ENST00000562680 SVBPQ8N300 66 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 PPP1R35Q8TAP8 253 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 SETD6Q8TBK2 473 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 POM121Q96HA1 1249 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 CLCC1Q96S66 551 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 SMOC1Q9H4F8 434 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 ERVK13-1Q9NX77 482 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 VNN3Q9NY84 501 aa6.85□□□□□ -1.31
TCF4-216ENST00000562680 TMEFF2Q9UIK5 374 aaPredicted RBP6.85□□□□□ -1.31
TCF4-216ENST00000562680 ZNF878C9JN71 531 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 SURF4O15260 269 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 CD79AP11912 226 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 ANXA3P12429 323 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 IFNGR1P15260 489 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 SPI1P17947 270 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 GCH1P30793 250 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 CDC20Q12834 499 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 SQSTM1Q13501 440 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 CSRP2Q16527 193 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 LBHQ53QV2 105 aaPredicted RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 DPY19L4Q7Z388 723 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 TMEM179BQ7Z7N9 219 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 C7orf50Q9BRJ6 194 aaKnown RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 OR51E2Q9H255 320 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 RAB9BQ9NP90 201 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 hCG_1807616A0A1W2PRN6 198 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 FIGNL2A6NMB9 653 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 ANKRD30BLA7E2S9 258 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 KDM4EB2RXH2 506 aaPredicted RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 F5H5K5 113 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 DNPH1O43598 174 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 PTP4A3O75365 173 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 AKR7A3O95154 331 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 RAF1P04049 648 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 CCL4P13236 92 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 ACP1P24666 158 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 PPIAP62937 165 aaKnown RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 EGR3Q06889 387 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 GPR176Q14439 515 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 ZXDCQ2QGD7 858 aaPredicted RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 EIF2S3LQ2VIR3 472 aaKnown RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 OR7E24Q6IFN5 339 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 ZNF584Q8IVC4 421 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 PTPMT1Q8WUK0 201 aaPredicted RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 RASD2Q96D21 266 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 FBXL3Q9UKT7 428 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 LHX6Q9UPM6 363 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 A0A0A6YYH2 397 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 PRSS37A4D1T9 235 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 NAP1L6A6NFF2 107 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 A6NJ64 397 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 OR2AT4A6NND4 320 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 PDGFBP01127 241 aaPredicted RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 OR8G3PP0DMU2 310 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 SLC2A1P11166 492 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 ACHEP22303 614 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 ALKBH1Q13686 389 aaKnown RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 GLYR1Q49A26 553 aaPredicted RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 ZNF813Q6ZN06 617 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 SNX29P2Q8IUI4 249 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 NKAIN3Q8N8D7 197 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 TRMT10AQ8TBZ6 339 aaKnown RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 SIGLEC7Q9Y286 467 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 CHD5Q8TDI0 1954 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 GABRPO00591 440 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 SNAPINO95295 136 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 WNT11O96014 354 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 DMWDQ09019 674 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 OR1C1Q15619 314 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 AANATQ16613 207 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 ZNF658BQ4V348 819 aaPredicted RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 PXKQ7Z7A4 578 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 YRDCQ86U90 279 aaKnown RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 CNEP1R1Q8N9A8 125 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 BBS1Q8NFJ9 593 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 OR8S1Q8NH09 359 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 SLC25A44Q96H78 314 aaPredicted RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 NECAB3Q96P71 396 aaPredicted RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 NRTNQ99748 197 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 TRAF4Q9BUZ4 470 aaPredicted RBP6.84□□□□□ -1.31
TCF4-216ENST00000562680 ATG5Q9H1Y0 275 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 PTTG3PQ9NZH4 202 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 NTNG1Q9Y2I2 539 aa6.84□□□□□ -1.31
TCF4-216ENST00000562680 SLC31A2O15432 143 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 HTR5AP47898 357 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms