RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 PRORSD1PA6NEY8 169 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 H0YL77 283 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 M0QX08 132 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 FMO6PO60774 539 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 FUT4P22083 530 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 RAG2P55895 527 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 SLC3A1Q07837 685 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 DBPQ10586 325 aaPredicted RBP9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 HLXQ14774 488 aaPredicted RBP9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 MOGQ16653 247 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 HIST3H3Q16695 136 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 CYP51A1Q16850 503 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 TUSC1Q2TAM9 212 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 MMEL1Q495T6 779 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 AGKQ53H12 422 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 MTX3Q5HYI7 312 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 LRIF1Q5T3J3 769 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 MBNL2Q5VZF2 373 aaKnown RBP9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 ZNF613Q6PF04 617 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 C16orf87Q6PH81 154 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 RHOUQ7L0Q8 258 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 PDZD9Q8IXQ8 264 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 SPICQ8N5J4 248 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 OR10S1Q8NGN2 331 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 FAM110DQ8TAY7 271 aaPredicted RBP9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 ZDHHC16Q969W1 377 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 THOC1Q96FV9 657 aaKnown RBP9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 OR2V2Q96R30 315 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 PRSS27Q9BQR3 290 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 CPPED1Q9BRF8 314 aaPredicted RBP9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 TMEM109Q9BVC6 243 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 MRPL13Q9BYD1 178 aaKnown RBP9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 CHIAQ9BZP6 476 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 SSU72Q9NP77 194 aaKnown RBP9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 INIPQ9NRY2 104 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 ZNF229Q9UJW7 825 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 PPP1R3CQ9UQK1 317 aa9.79□□□□□ -0.84
NSMCE1-202ENST00000561960 TRBV5-3A0A0A0MS03 114 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 TRAPPC13A5PLN9 417 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 POM121CA8CG34 1229 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 F5H0A9 414 aaPredicted RBP9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 SERPINB7O75635 380 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 ABHD16AO95870 558 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 SFTPBP07988 381 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 RPS2P15880 293 aaKnown RBP9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 CD247P20963 164 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 MMP16P51512 607 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 STX1BP61266 288 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 PRB3Q04118 309 aaPredicted RBP9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 BLOC1S3Q6QNY0 202 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 LYPD2Q6UXB3 125 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 LRRC28Q86X40 367 aaPredicted RBP9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 POU5F2Q8N7G0 328 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 BHLHE23Q8NDY6 225 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 UBE2FQ969M7 185 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 TAMM41Q96BW9 452 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 CMBLQ96DG6 245 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 C4orf45Q96LM5 186 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 CDADC1Q9BWV3 514 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 SSBP3Q9BWW4 388 aaPredicted RBP9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 SIAEQ9HAT2 523 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 SLCO1B3Q9NPD5 702 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 C1RLQ9NZP8 487 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 PRDM4Q9UKN5 801 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 STARD10Q9Y365 291 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 USH1CQ9Y6N9 552 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 RYR3Q15413 4870 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 TET2Q6N021 2002 aaPredicted RBP9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 DNAH3Q8TD57 4116 aa9.78□□□□□ -0.84
NSMCE1-202ENST00000561960 IGHV2-70DA0A0C4DH43 119 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 OR7A10O76100 309 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 MTNR1AP48039 350 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 FGF12P61328 243 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 GNB2P62879 340 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 MRPS34P82930 218 aaKnown RBP9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 PAX8Q06710 450 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 CDK5R2Q13319 367 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 ENDOGQ14249 297 aaKnown RBP9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 C10orf128Q5T292 105 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 ARMC4Q5T2S8 1044 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 SWT1Q5T5J6 900 aaKnown RBP9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 KLBQ86Z14 1044 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 KIRREL3Q8IZU9 778 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 ZNF283Q8N7M2 679 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 ATG16L2Q8NAA4 619 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 PCGF1Q9BSM1 259 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 SLITRK2Q9H156 845 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 TMEM38AQ9H6F2 299 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 WDR76Q9H967 626 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 NANOGQ9H9S0 305 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 ZMAT3Q9HA38 289 aaKnown RBP9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 PTTG3PQ9NZH4 202 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 KLHL21Q9UJP4 597 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 ZDHHC8Q9ULC8 765 aa9.77□□□□□ -0.85
NSMCE1-202ENST00000561960 PPIAL4EA0A075B759 164 aa9.76□□□□□ -0.85
NSMCE1-202ENST00000561960 PPIAL4CA0A0B4J2A2 164 aa9.76□□□□□ -0.85
NSMCE1-202ENST00000561960 EVPLLA8MZ36 301 aa9.76□□□□□ -0.85
NSMCE1-202ENST00000561960 PPIAL4DF5H284 164 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms