RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 CYP4Z2PQ8N1L4 340 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 C2orf73Q8N5S3 287 aaPredicted RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 TMEM156Q8N614 296 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 ZNF525Q8N782 197 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 ACOT4Q8N9L9 421 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 OR2M7Q8NG81 312 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 BBS10Q8TAM1 723 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 GIPC3Q8TF64 312 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 SMAP2Q8WU79 429 aaPredicted RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 SLC38A5Q8WUX1 472 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 RORBQ92753 470 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 TANKQ92844 425 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 ERGIC1Q969X5 290 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 OTULINQ96BN8 352 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 MS4A6EQ96DS6 147 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 OTUB1Q96FW1 271 aaPredicted RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 AMDHD1Q96NU7 426 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 TRNT1Q96Q11 434 aaKnown RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 ZNF300Q96RE9 604 aaPredicted RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 SERINC2Q96SA4 455 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 DPH7Q9BTV6 452 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 ACAT2Q9BWD1 397 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 SF3B5Q9BWJ5 86 aaKnown RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 GABARAPL3Q9BY60 117 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 POLR2J2Q9GZM3 115 aaKnown RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 CHRNA10Q9GZZ6 450 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 RACGAP1Q9H0H5 632 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 POLR2J3Q9H1A7 115 aaKnown RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 ANKRD19PQ9H560 264 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 DUSP21Q9H596 190 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 MTHFD2LQ9H903 347 aaPredicted RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 SIAEQ9HAT2 523 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 ANKHQ9HCJ1 492 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 LYRM4Q9HD34 91 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 MMP25Q9NPA2 562 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 POLE3Q9NRF9 147 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 CYSLTR2Q9NS75 346 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 SLC6A13Q9NSD5 602 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 PLCXD1Q9NUJ7 323 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 HIF1ANQ9NWT6 349 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 CLN6Q9NWW5 311 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 IMPAD1Q9NX62 359 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 P2RX2Q9UBL9 471 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 MGAT4BQ9UQ53 548 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 EXO1Q9UQ84 846 aaKnown RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 ERVK-11Q9UQG0 969 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 B3GALT5Q9Y2C3 310 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 POFUT2Q9Y2G5 429 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 IFT52Q9Y366 437 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 GMPPBQ9Y5P6 360 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 SLC22A7Q9Y694 548 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 CEPT1Q9Y6K0 416 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 ENPP4Q9Y6X5 453 aa2.79□□□□□ -1.96
SPG11-225ENST00000561391 DYNC2H1Q8NCM8 4307 aaKnown RBP2.79□□□□□ -1.96
SPG11-225ENST00000561391 LCE6AA0A183 80 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 A0A1W2PRQ8 180 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 FEZF1A0PJY2 475 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 OR2A25A4D2G3 310 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 EFCAB10A6NFE3 127 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 ZNF99A8MXY4 864 aaPredicted RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 USP17L23D6RBM5 183 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 NPIPB11E5RHQ5 1161 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 H3BSA7 217 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 M0QZ24 198 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 SAP18O00422 153 aaKnown RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 PLOD2O00469 737 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 FAAHO00519 579 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 SLC22A1O15245 554 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 ERI3O43414 337 aaKnown RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 SPRY3O43610 288 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 B4GALT2O60909 372 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 SEC14L2O76054 403 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 GLSO94925 669 aaPredicted RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 MFN2O95140 757 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 PPP1R3DO95685 299 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 ANGPTL1O95841 491 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 CD8AP01732 235 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 MT-ND1P03886 318 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 LCATP04180 440 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 H1F0P07305 194 aaKnown RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 GNAO1P09471 354 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 DANCRP0C864 163 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 IL7RP16871 459 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 CCNA2P20248 432 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 EFNA1P20827 205 aaPredicted RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 MAGP20916 626 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 CHMP24386 653 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 SOAT1P35610 550 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 ARL3P36405 182 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 XCR1P46094 333 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 RFX2P48378 723 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 PCYT1AP49585 367 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 DAPP51397 102 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 NCBP2P52298 156 aaKnown RBP eCLIP2.78□□□□□ -1.96
SPG11-225ENST00000561391 PLA2G16P53816 162 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 TUBA1BP68363 451 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 PSPHP78330 225 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 RPP38P78345 283 aaKnown RBP2.78□□□□□ -1.96
SPG11-225ENST00000561391 HPCAP84074 193 aa2.78□□□□□ -1.96
SPG11-225ENST00000561391 IL5RAQ01344 420 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms